RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 PAK1Q13153 545 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 ZNF77Q15935 545 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 ZNF394Q53GI3 561 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 ZNF852Q6ZMS4 543 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 TRIML1Q8N9V2 468 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 HNRNPABQ99729 332 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 NT5C1AQ9BXI3 368 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 CISHQ9NSE2 258 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 NDRG2Q9UN36 371 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 TRAV19A0A0A6YYK7 116 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 FAM92AA1XBS5 289 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 OLFM2O95897 454 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 OAS1P00973 400 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 ARSAP15289 507 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 ADORA2BP29275 332 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 RAD23BP54727 409 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 MAP3K7CLP57077 242 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 CLEC20AQ6ZU45 233 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 UBR7Q8N806 425 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 SLC4A11Q8NBS3 891 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 LMO3Q8TAP4 145 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 FAM3CQ92520 227 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 CYFIP2Q96F07 1278 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 FAXDC2Q96IV6 333 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 KIF9Q9HAQ2 790 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 METTL14Q9HCE5 456 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 TRPM5Q9NZQ8 1165 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 ATP8B3O60423 1300 aa17.64■□□□□ 0.41
CCHCR1-214ENST00000486060 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 SPECC1L-ADORA2AF8WAN1 911 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 CKMP06732 381 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 USP17L7P0C7H9 530 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 HDCP19113 662 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 YWHAQP27348 245 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 CTHP32929 405 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 MLLT6P55198 1093 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 CCDC40Q4G0X9 1142 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 PPP1R26Q5T8A7 1209 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 TRIM59Q8IWR1 403 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 CSGALNACT1Q8TDX6 532 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 SRRTQ9BXP5 876 aaKnown RBP17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 EBF3Q9H4W6 596 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 CHORDC1Q9UHD1 332 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 ARHGAP26Q9UNA1 814 aa17.63■□□□□ 0.41
CCHCR1-214ENST00000486060 EML5Q05BV3 1969 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 MYO18AQ92614 2054 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 MAN2B1O00754 1011 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 PMM2O15305 246 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 RTN3O95197 1032 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 ZDHHC11BP0C7U3 371 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 CHRNB1P11230 501 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 TCF3P15923 654 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 MARSP56192 900 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 PLCB2Q00722 1185 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 LRMPQ12912 555 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 MTF1Q14872 753 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 C1orf210Q8IVY1 113 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 SH3RF2Q8TEC5 729 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 ATOH1Q92858 354 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 FBXO32Q969P5 355 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 NELL2Q99435 816 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 GMIPQ9P107 970 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 WNT6Q9Y6F9 365 aa17.62■□□□□ 0.41
CCHCR1-214ENST00000486060 ABL1P00519 1130 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 FAM200BP0CF97 657 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 RPS9P46781 194 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 KPNA1P52294 538 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 SLC7A9P82251 487 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 CUL2Q13617 745 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 RUNX3Q13761 415 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 GAS6Q14393 721 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 ITPRIPL2Q3MIP1 535 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 SNX30Q5VWJ9 437 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 NAIF1Q69YI7 327 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 ALYREFQ86V81 257 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 IRF2BP1Q8IU81 584 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 KAT5Q92993 513 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 TMEM176AQ96HP8 235 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 ZFRQ96KR1 1074 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 SLITRK1Q96PX8 696 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 LINC00597Q9H2U6 94 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 C8orf33Q9H7E9 229 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 RBM12Q9NTZ6 932 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 THG1LQ9NWX6 298 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
CCHCR1-214ENST00000486060 LEFTY2O00292 366 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 PFKLP17858 780 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 PPP3CCP48454 512 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 MRE11P49959 708 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 PON2Q15165 354 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 EML3Q32P44 896 aa17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 RALGPS2Q86X27 583 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-214ENST00000486060 TTC16Q8NEE8 873 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms