RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 C11orf57Q6ZUT1 292 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 BHLHA9Q7RTU4 235 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 USP37Q86T82 979 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 UBALD2Q8IYN6 164 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SLC44A3Q8N4M1 653 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 MYCBPAPQ8TBZ2 947 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 WBP2Q969T9 261 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CCDC47Q96A33 483 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 SYAP1Q96A49 352 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 CCDC127Q96BQ5 260 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ACSF2Q96CM8 615 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 TRMT2BQ96GJ1 504 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 SPATA17Q96L03 361 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CEP63Q96MT8 703 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 FNBP1Q96RU3 617 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SLC22A12Q96S37 553 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 LRFN3Q9BTN0 628 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TTLL2Q9BWV7 592 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CLSTN2Q9H4D0 955 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ZFAND3Q9H8U3 227 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TMEM8AQ9HCN3 771 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CSNK1G1Q9HCP0 422 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ATP13A2Q9NQ11 1180 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TRPV5Q9NQA5 729 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CYLDQ9NQC7 956 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SLC2A4RGQ9NR83 387 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 DDX43Q9NXZ2 648 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 DACH1Q9UI36 760 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 HOOK1Q9UJC3 728 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 CDH9Q9ULB4 789 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CDH7Q9ULB5 785 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SORCS3Q9UPU3 1222 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 FRMD4BQ9Y2L6 1034 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SNX9Q9Y5X1 595 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TNRC6BQ9UPQ9 1833 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 OTOGLQ3ZCN5 2332 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 KRBA1A5PL33 1030 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 HHLA1C9JL84 531 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CLDN5O00501 218 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TNFRSF10BO14763 440 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CETN3O15182 167 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 ECI2O75521 394 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 NOL4O94818 638 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GLULP15104 373 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 PCSK1P29120 753 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GCLMP48507 274 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 MLLT6P55198 1093 aaPredicted RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 ARPP19P56211 112 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 NOP14P78316 857 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 CYP4F8P98187 520 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 MYL7Q01449 175 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 MESP2Q0VG99 397 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TWF1Q12792 350 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 PLD1Q13393 1074 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TDGQ13569 410 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CAMK4Q16566 473 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 EML3Q32P44 896 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 PABPC1LQ4VXU2 614 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 SLC39A12Q504Y0 691 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CT47A1Q5JQC4 288 aaPredicted RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 KRT39Q6A163 491 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 VSTM1Q6UX27 236 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GET4Q7L5D6 327 aaPredicted RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 DNAJB7Q7Z6W7 309 aaPredicted RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 UNC93AQ86WB7 457 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 ARHGEF19Q8IW93 802 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TRIM59Q8IWR1 403 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 DCP1BQ8IZD4 617 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 ADGRF2Q8IZF7 708 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 THEM5Q8N1Q8 247 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TDRD5Q8NAT2 981 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 NOC3LQ8WTT2 800 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 MYLPFQ96A32 169 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 PCED1BQ96HM7 432 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 ASB16Q96NS5 453 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 DDX23Q9BUQ8 820 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 ZNF518BQ9C0D4 1074 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GPR88Q9GZN0 384 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 ELOVL4Q9GZR5 314 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 SMG9Q9H0W8 520 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 CYP4F11Q9HBI6 524 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 TMEM63CQ9P1W3 806 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GMPR2Q9P2T1 348 aaKnown RBP6.1□□□□□ -1.43
CUX1-208ENST00000485792 WNT16Q9UBV4 365 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 ZMYM5Q9UJ78 669 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 GTF3C4Q9UKN8 822 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 DUSP12Q9UNI6 340 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CTNND2Q9UQB3 1225 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 CCL26Q9Y258 94 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 DMXL1Q9Y485 3027 aa6.1□□□□□ -1.43
CUX1-208ENST00000485792 OTOL1A6NHN0 477 aaPredicted RBP6.09□□□□□ -1.43
CUX1-208ENST00000485792 TULP2O00295 520 aa6.09□□□□□ -1.43
CUX1-208ENST00000485792 PRRG1O14668 218 aa6.09□□□□□ -1.43
CUX1-208ENST00000485792 ZNF197O14709 1029 aa6.09□□□□□ -1.43
CUX1-208ENST00000485792 PSMA7O14818 248 aa6.09□□□□□ -1.43
CUX1-208ENST00000485792 P4HA2O15460 535 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms