RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 ROR1Q01973 937 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 RNF220Q5VTB9 566 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 APLFQ8IW19 511 aaPredicted RBP12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 NAT8LQ8N9F0 302 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 THTPAQ9BU02 230 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 CACNA2D1P54289 1103 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 ENPEPQ07075 957 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 ALYREFQ86V81 257 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 WDR60Q8WVS4 1066 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 NMUR2Q9GZQ4 415 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 NIF3L1Q9GZT8 377 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 FETUBQ9UGM5 382 aa12.94□□□□□ -0.34
PLXNB1-218ENST00000485535 ARHGAP42A6NI28 874 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NPTXRO95502 500 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 KDELR1P24390 212 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 RTP1P59025 263 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 IRX4P78413 519 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF699Q32M78 642 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 C1orf146Q5VVC0 180 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SERAC1Q96JX3 654 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 FGD4Q96M96 766 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 RAB6BQ9NRW1 208 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NFASCO94856 1347 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 TCRBV9S1A1TA0A576 114 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SNUPNO95149 360 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 FESP07332 822 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NRLP54845 237 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 ALDH18A1P54886 795 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 OSTNP61366 133 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 FAM182AQ5T1J6 154 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 RASIP1Q5U651 963 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 CRLF3Q8IUI8 442 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 JOSD2Q8TAC2 188 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 PTCD3Q96EY7 689 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 WWP1Q9H0M0 922 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NUMBLQ9Y6R0 609 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SMAPO00193 183 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 CD48P09326 243 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 OCRLQ01968 901 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 DPYSL3Q14195 570 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 THNSL1Q8IYQ7 743 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 E2F7Q96AV8 911 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 FRMD8P1Q9BZ68 369 aaPredicted RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF518BQ9C0D4 1074 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 NDE1Q9NXR1 346 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 STX18Q9P2W9 335 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
PLXNB1-218ENST00000485535 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 WNT10BO00744 389 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 MAFGO15525 162 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 LRCH4O75427 683 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 CDH6P55285 790 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 MTMR2Q13614 643 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 CHI3L2Q15782 390 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 SGSM1Q2NKQ1 1148 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 CMPK2Q5EBM0 449 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 FAXCQ5TGI0 409 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 TTC39BQ5VTQ0 682 aaPredicted RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 DENND1BQ6P3S1 775 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 SAMD7Q7Z3H4 446 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 POLNQ7Z5Q5 900 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF184Q99676 751 aaPredicted RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 MECRQ9BV79 373 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 WASF2Q9Y6W5 498 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 SNRPAP09012 282 aaKnown RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 ZCCHC18P0CG32 403 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 PTPN7P35236 360 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 NAMPTP43490 491 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 YWHAEP62258 255 aaKnown RBP12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 AP2B1P63010 937 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 CLDN10P78369 228 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 AP1B1Q10567 949 aa12.92□□□□□ -0.34
PLXNB1-218ENST00000485535 KRT81Q14533 505 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms