RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 VPS16Q9H269 839 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ASAH2Q9NR71 780 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 SLC2A4RGQ9NR83 387 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 HSF2BPO75031 334 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 SOAT2O75908 522 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 GJA1P17302 382 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 TCP1P17987 556 aaKnown RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 AOC1P19801 751 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 NUBP1P53384 320 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 FIGNQ5HY92 759 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 LMBRD2Q68DH5 695 aaPredicted RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 TANGO2Q6ICL3 276 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 POTEHQ6S545 545 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ALYREFQ86V81 257 aaKnown RBP11.39□□□□□ -0.59
DDX56-212ENST00000485367 CBWD2Q8IUF1 395 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 TTC9BQ8N6N2 239 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 C1orf127Q8N9H9 656 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 LEMD2Q8NC56 503 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 SCFD1Q8WVM8 642 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 RTP3Q9BQQ7 232 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 MTMR12Q9C0I1 747 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ZCWPW1Q9H0M4 648 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 SLC39A2Q9NP94 309 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ARHGEF3Q9NR81 526 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 ITGA11Q9UKX5 1188 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 SNX12Q9UMY4 172 aa11.39□□□□□ -0.59
DDX56-212ENST00000485367 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 A0A1W2PQJ5 194 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 H0Y858 1186 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
DDX56-212ENST00000485367 ENC1O14682 589 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 ECI2O75521 394 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 MICAL2O94851 1124 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 TMEM191BP0C7N4 346 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 CYP2J2P51589 502 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 VAV2P52735 878 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 RBP5P82980 135 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 FAM78AQ5JUQ0 283 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 OTUD6BQ8N6M0 293 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 RDH13Q8NBN7 331 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 ATOH1Q92858 354 aaPredicted RBP11.38□□□□□ -0.59
DDX56-212ENST00000485367 ZSWIM3Q96MP5 696 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 SEPT5Q99719 369 aaPredicted RBP11.38□□□□□ -0.59
DDX56-212ENST00000485367 PLA2G2FQ9BZM2 168 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 FAM86C1Q9NVL1 165 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
DDX56-212ENST00000485367 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 CLIC2O15247 247 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 TGFB1I1O43294 461 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 HUS1O60921 280 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 TACC1O75410 805 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 MOSPD3O75425 235 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 TNNC2P02585 160 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 PPP1R2P41236 205 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 EPHA5P54756 1037 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 ZBED6P86452 979 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 EHHADHQ08426 723 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 KCNB1Q14721 858 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 SURF1Q15526 300 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 TEAD2Q15562 447 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 MGAT5BQ3V5L5 792 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 WDR59Q6PJI9 974 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 KDM7AQ6ZMT4 941 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.59
DDX56-212ENST00000485367 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 DNAJB7Q7Z6W7 309 aaPredicted RBP11.37□□□□□ -0.59
DDX56-212ENST00000485367 LRRTM3Q86VH5 581 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
DDX56-212ENST00000485367 LRRC52Q8N7C0 313 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 OR5B17Q8NGF7 314 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 SHKBP1Q8TBC3 707 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 ANKRD36BP1Q96IX9 119 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
DDX56-212ENST00000485367 SIX4Q9UIU6 781 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 UBE4BO95155 1302 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 PTPRJQ12913 1337 aa11.37□□□□□ -0.59
DDX56-212ENST00000485367 NDUFAB1O14561 156 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 RPN1P04843 607 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 MYBL2P10244 700 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 FNTAP49354 379 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 TUFMP49411 452 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 TSPY1Q01534 308 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 PFKPQ01813 784 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SNRNP35Q16560 246 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 DUOXA2Q1HG44 320 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms