RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 SLFN14P0C7P3 912 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 ARF4P18085 180 aaPredicted RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 POU3F2P20265 443 aaPredicted RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 PDCP20941 246 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 MAOBP27338 520 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 TNFRSF8P28908 595 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 MMP16P51512 607 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 CBX1P83916 185 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 PLA2G4FQ68DD2 849 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 NAIF1Q69YI7 327 aaPredicted RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 DPH6Q7L8W6 267 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 DNAJB7Q7Z6W7 309 aaPredicted RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 USP37Q86T82 979 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 FERMT3Q86UX7 667 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 CDR2LQ86X02 465 aaPredicted RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 MAB21L3Q8N8X9 362 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 MRPS31Q92665 395 aaKnown RBP6.84□□□□□ -1.31
CAPN13-206ENST00000485248 PSMG2Q969U7 264 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 PSMG3-AS1Q96PY0 264 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 MTRQ99707 1265 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 TMPRSS4Q9NRS4 437 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 THSD1Q9NS62 852 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 SLC38A7Q9NVC3 462 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 GMIPQ9P107 970 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 BTBD3Q9Y2F9 522 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 PCDHB11Q9Y5F2 797 aa6.84□□□□□ -1.31
CAPN13-206ENST00000485248 HELZP42694 1942 aaKnown RBP6.84□□□□□ -1.32
CAPN13-206ENST00000485248 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 IGHV1OR15-9A0A0B4J2B8 117 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 hCG_1642624A0A1W2PR95 340 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 hCG_1984214I3L0E3 225 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 K7ENP7 123 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 K7EQS6 105 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SGK1O00141 431 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 PTGESO14684 152 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 N4BP3O15049 544 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 NDUFB5O43674 189 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 LDOC1O95751 146 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 HOXB2P14652 356 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 PTENP60484 403 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 PSMC5P62195 406 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 YWHAHQ04917 246 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 DUSP4Q13115 394 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 EMC2Q15006 297 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 UPP1Q16831 310 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 GLRA4Q5JXX5 417 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 INO80CQ6PI98 192 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 GAREM2Q75VX8 874 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 RUFY3Q7L099 469 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 CYB5R4Q7L1T6 521 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 OTUD6AQ7L8S5 288 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ADAT2Q7Z6V5 191 aaKnown RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ATCAYQ86WG3 371 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ZNF713Q8N859 430 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 IL17RCQ8NAC3 791 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SPATA20Q8TB22 786 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SNRNP27Q8WVK2 155 aaKnown RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 RUFY2Q8WXA3 655 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SNX19Q92543 992 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 EZH1Q92800 747 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 RILPL2Q969X0 211 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ZNF419Q96HQ0 510 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 MRFAP1L1Q96HT8 127 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 CNDP2Q96KP4 475 aaKnown RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 ZNF830Q96NB3 372 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 MMS19Q96T76 1030 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 RIT2Q99578 217 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SEPT5Q99719 369 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SCAND2PQ9GZW5 306 aaPredicted RBP6.83□□□□□ -1.32
CAPN13-206ENST00000485248 C6orf50Q9HD87 102 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 STARD5Q9NSY2 213 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 SMC3Q9UQE7 1217 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 GDAQ9Y2T3 454 aa6.83□□□□□ -1.32
CAPN13-206ENST00000485248 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 ANK1P16157 1881 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 E2F8A0AVK6 867 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 ESYT2A0FGR8 921 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 CCDC66A2RUB6 948 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 PODXLO00592 558 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 AGFG2O95081 481 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 PLEKHA8P1O95397 391 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 CKMP06732 381 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 CYP3A4P08684 503 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 NCAM1P13591 858 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 ABCB4P21439 1286 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 MPSTP25325 297 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 CD6P30203 668 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 TUFMP49411 452 aaKnown RBP6.82□□□□□ -1.32
CAPN13-206ENST00000485248 ZNF75DP51815 510 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 AFF3P51826 1226 aaKnown RBP6.82□□□□□ -1.32
CAPN13-206ENST00000485248 CLDN6P56747 220 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 ERVPABLB-1P60509 514 aa6.82□□□□□ -1.32
CAPN13-206ENST00000485248 GABREP78334 506 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms