RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TNFRSF4P43489 277 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 KIR2DL1P43626 348 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-227ENST00000485102 PSMC1P62191 440 aaKnown RBP13.88□□□□□ -0.19
HDAC6-227ENST00000485102 IRX4P78413 519 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 SH3PXD2AQ5TCZ1 1133 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 UNQ6494/PRO21346Q6UXR6 183 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 TRAPPC11Q7Z392 1133 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 CYP2U1Q7Z449 544 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 CBWD2Q8IUF1 395 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 OTUB2Q96DC9 234 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-227ENST00000485102 TPSD1Q9BZJ3 242 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 A0A087X0B3 334 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 E2F8A0AVK6 867 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 F8VP50 259 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 KAT7O95251 611 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 ADH1CP00326 375 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 PDGFRBP09619 1106 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 HNRNPLP14866 589 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 BCKDHBP21953 392 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 HOXD12P35452 270 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 HOXD13P35453 343 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 GRIA2P42262 883 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 SNRPFP62306 86 aaKnown RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 CYP27A1Q02318 531 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 ZNF252P-AS1Q0IIN9 211 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 LMAN2Q12907 356 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TAF10Q12962 218 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 RESTQ13127 1097 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 BYSLQ13895 437 aaKnown RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 EOGTQ5NDL2 527 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 SNX30Q5VWJ9 437 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TDRD10Q5VZ19 366 aaKnown RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 CCDC33Q8N5R6 958 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 OVCA2Q8WZ82 227 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 INTS4Q96HW7 963 aaKnown RBP13.87□□□□□ -0.19
HDAC6-227ENST00000485102 SLITRK1Q96PX8 696 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 ELOVL4Q9GZR5 314 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 KBTBD4Q9NVX7 518 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 IL37Q9NZH6 218 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 NME7Q9Y5B8 376 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 CPQQ9Y646 472 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
HDAC6-227ENST00000485102 TNRC6BQ9UPQ9 1833 aaKnown RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 ANTXRLA6NF34 631 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 PATE3B3GLJ2 98 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 SGK1O00141 431 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 EIF3DO15371 548 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 APODP05090 189 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 HSP90AA1P07900 732 aaKnown RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 PTPN1P18031 435 aaKnown RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 MESP2Q0VG99 397 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 MAP7D1Q3KQU3 841 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 SLC23A3Q6PIS1 610 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 LPCAT2Q7L5N7 544 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 EPM2AIP1Q7L775 607 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 PHTF2Q8N3S3 785 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 TXNDC5Q8NBS9 432 aaKnown RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 PDZD8Q8NEN9 1154 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 MMS19Q96T76 1030 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 MRPL45Q9BRJ2 306 aaKnown RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 POLMQ9NP87 494 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-227ENST00000485102 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
HDAC6-227ENST00000485102 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 C1QTNF9BB2RNN3 333 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 ADAM23O75077 832 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-227ENST00000485102 C1QTNF9P0C862 333 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 SLC6A11P48066 632 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 DHPSP49366 369 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-227ENST00000485102 TUBP50607 506 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 SEC13P55735 322 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 PSMD6Q15008 389 aa13.85□□□□□ -0.19
HDAC6-227ENST00000485102 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms