RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 HOXD13P35453 343 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 PTGER3P43115 390 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 AARSP49588 968 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRUB1-202ENST00000485065 YWHAHQ04917 246 aaPredicted RBP10.56□□□□□ -0.72
TRUB1-202ENST00000485065 MYBPC2Q14324 1141 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 CRY1Q16526 586 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 FOXD4L5Q5VV16 416 aaPredicted RBP10.56□□□□□ -0.72
TRUB1-202ENST00000485065 LYSMD4Q5XG99 296 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 TRIM68Q6AZZ1 485 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 ANO7Q6IWH7 933 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 CC2D1AQ6P1N0 951 aaPredicted RBP10.56□□□□□ -0.72
TRUB1-202ENST00000485065 TOGARAM2Q6ZUX3 1019 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 TMPRSS7Q7RTY8 843 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 CPA6Q8N4T0 437 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 MINDY1Q8N5J2 469 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 USP33Q8TEY7 942 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 FOXD4L4Q8WXT5 416 aaPredicted RBP10.56□□□□□ -0.72
TRUB1-202ENST00000485065 GCNAQ96QF7 691 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 TDP1Q9NUW8 608 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 TBC1D7Q9P0N9 293 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 CCDC39Q9UFE4 941 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 MMP17Q9ULZ9 603 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 CFAP46Q8IYW2 2715 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
TRUB1-202ENST00000485065 UNC79Q9P2D8 2635 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 SCN1AP35498 2009 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 GJB3O75712 270 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 CFIP05156 583 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 KRT18P05783 430 aaKnown RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 SYPP08247 313 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ZSCAN22P10073 491 aaPredicted RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ARSAP15289 507 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 SCP2P22307 547 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 MCM4P33991 863 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 AVPR1AP37288 418 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ACOT2P49753 483 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 LIG4P49917 911 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ZNF268Q14587 947 aaPredicted RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 HSF5Q4G112 596 aaPredicted RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 SPATA1Q5VX52 437 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 TMEFF1Q8IYR6 380 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ZNF843Q8N446 348 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 PDILTQ8N807 584 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 USP13Q92995 863 aaPredicted RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 HPS3Q969F9 1004 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 BICD1Q96G01 975 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 PGLYRP2Q96PD5 576 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 MSTO1Q9BUK6 570 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 GTPBP2Q9BX10 602 aaKnown RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ECT2Q9H8V3 914 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 KBTBD4Q9NVX7 518 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
TRUB1-202ENST00000485065 PTPRQQ9UMZ3 2332 aa10.55□□□□□ -0.72
TRUB1-202ENST00000485065 ADAMTS9Q9P2N4 1935 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 ANO9A1A5B4 782 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 MTMR11A4FU01 709 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 E9PAM4 449 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 PIRO00625 290 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 AP5Z1O43299 807 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 SH3BP5O60239 455 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 TBCAO75347 108 aaKnown RBP10.54□□□□□ -0.72
TRUB1-202ENST00000485065 YEATS4O95619 227 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 F13A1P00488 732 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 AVPP01185 164 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 NFICP08651 508 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 CYP3A5P20815 502 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 ITPKAP23677 461 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 ABCG1P45844 678 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 TUFMP49411 452 aaKnown RBP10.54□□□□□ -0.72
TRUB1-202ENST00000485065 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
TRUB1-202ENST00000485065 CYP4F8P98187 520 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 BFSP1Q12934 665 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 NR1H3Q13133 447 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 PSMD2Q13200 908 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 VEPH1Q14D04 833 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 STK38Q15208 465 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
TRUB1-202ENST00000485065 JADE1Q6IE81 842 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
TRUB1-202ENST00000485065 CCDC73Q6ZRK6 1079 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 PNPLA1Q8N8W4 532 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 ATAD1Q8NBU5 361 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 RASSF8Q8NHQ8 419 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 FAM84AQ96KN4 292 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 OLFML3Q9NRN5 406 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 RCOR1Q9UKL0 485 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
TRUB1-202ENST00000485065 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms