RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 C17orf75Q9HAS0 396 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 FBRSL1Q9HCM7 1045 aaKnown RBP9.2□□□□□ -0.94
DDX39B-221ENST00000484566 DSEQ9UL01 958 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TBX20Q9UMR3 447 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TCHHQ07283 1943 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 CREBBPQ92793 2442 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 COL6A6A6NMZ7 2263 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 DOPEY2Q9Y3R5 2298 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 UPK3BL1B0FP48 263 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 UPK3BL2E5RIL1 263 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 TNFRSF10BO14763 440 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 CLDN3O15551 220 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 PFKFB2O60825 505 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 IL2RAP01589 272 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 CLTAP09496 248 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ENGP17813 658 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 PAX3P23760 479 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 NMT1P30419 496 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 NLRP12P59046 1061 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ORC2Q13416 577 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 HNRNPDQ14103 355 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ZNF268Q14587 947 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 KYAT1Q16773 422 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 LYSMD4Q5XG99 296 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 NAIF1Q69YI7 327 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 TMEM214Q6NUQ4 689 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 TAS1R3Q7RTX0 852 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 METTL23Q86XA0 190 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 SYT12Q8IV01 421 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 MDGA1Q8NFP4 955 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 OR10T2Q8NGX3 314 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 OSCP1Q8WVF1 389 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ZBTB45Q96K62 511 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 SENP8Q96LD8 212 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 DUS2Q9NX74 493 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 KCNG1Q9UIX4 513 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 TNRC6BQ9UPQ9 1833 aaKnown RBP9.19□□□□□ -0.94
DDX39B-221ENST00000484566 PTPRDP23468 1912 aa9.19□□□□□ -0.94
DDX39B-221ENST00000484566 FAM221BA6H8Z2 402 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SLC16A4O15374 487 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 EPB41L2O43491 1005 aaKnown RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 OPHN1O60890 802 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 DTNBO60941 627 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 NFATC1O95644 943 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 CFIP05156 583 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 HOXD12P35452 270 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 GUCY2FP51841 1108 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SMTNP53814 917 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SEC13P55735 322 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 MCL1Q07820 350 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SCAPQ12770 1279 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SEMA3BQ13214 749 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SAFBQ15424 915 aaKnown RBP eCLIP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 C2orf27AQ580R0 203 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 TXNDC8Q6A555 127 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SLC23A3Q6PIS1 610 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 ZPBP2Q6X784 338 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 CENPQQ7L2Z9 268 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 PIP4P1Q86T03 277 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 MON1AQ86VX9 555 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 THEM5Q8N1Q8 247 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 CHCHD4Q8N4Q1 142 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SNX29Q8TEQ0 813 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 BICD1Q96G01 975 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 TSPAN18Q96SJ8 248 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 ATXN2Q99700 1313 aaKnown RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 GTPBP2Q9BX10 602 aaKnown RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 ZCWPW1Q9H0M4 648 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 TRPC7Q9HCX4 862 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 BCCIPQ9P287 314 aaKnown RBP eCLIP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 UXTQ9UBK9 157 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 MMP17Q9ULZ9 603 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SRPK3Q9UPE1 567 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
DDX39B-221ENST00000484566 SCN1AP35498 2009 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 PLXNB3Q9ULL4 1909 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 TRAV19A0A0A6YYK7 116 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 H3BM21 787 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 CTDNEP1O95476 244 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 F11P03951 625 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 CYP11A1P05108 521 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 CKMP06732 381 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 CSH1P0DML2 217 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 CSH2P0DML3 217 aa9.17□□□□□ -0.94
DDX39B-221ENST00000484566 HAPLN1P10915 354 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms