RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ATG13O75143 517 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 RNF40O75150 1001 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 CNR2P34972 360 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 PIK3CAP42336 1068 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 GALK1P51570 392 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 DPYDQ12882 1025 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 NR1H3Q13133 447 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 SRSF5Q13243 272 aaKnown RBP30.17■■■□□ 2.42
HLA-C-207ENST00000484378 SGSM1Q2NKQ1 1148 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 KRBA2Q6ZNG9 492 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 NUP93Q8N1F7 819 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 GOLPH3LQ9H4A5 285 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 FBRSL1Q9HCM7 1045 aaKnown RBP30.17■■■□□ 2.42
HLA-C-207ENST00000484378 USP18Q9UMW8 372 aa30.17■■■□□ 2.42
HLA-C-207ENST00000484378 LEFTY2O00292 366 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 HRO43593 1189 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 RTN3O95197 1032 aaPredicted RBP30.16■■■□□ 2.42
HLA-C-207ENST00000484378 NFATC1O95644 943 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 NR2F2P24468 414 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 HOXA6P31267 233 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 SLC7A9P82251 487 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 SV2AQ7L0J3 742 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 CD101Q93033 1021 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 DMAP1Q9NPF5 467 aaPredicted RBP30.16■■■□□ 2.42
HLA-C-207ENST00000484378 MAPK8IP1Q9UQF2 711 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 CPQQ9Y646 472 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 DNAH14Q0VDD8 3507 aa30.16■■■□□ 2.42
HLA-C-207ENST00000484378 IKBKBO14920 756 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 YWHAQP27348 245 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 HOXC13P31276 330 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 ZXDBP98169 803 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 FBXO43Q4G163 708 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 ACOT1Q86TX2 421 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 WDR5BQ86VZ2 330 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 PDZD8Q8NEN9 1154 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 TAF4BQ92750 862 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 FBXO32Q969P5 355 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 SMARCD1Q96GM5 515 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 KCNK16Q96T55 309 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 RNF38Q9H0F5 515 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 LINC00597Q9H2U6 94 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 SMPD4Q9NXE4 827 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 SLC8A2Q9UPR5 921 aa30.15■■■□□ 2.42
HLA-C-207ENST00000484378 OLFM2O95897 454 aa30.14■■■□□ 2.42
HLA-C-207ENST00000484378 OAS1P00973 400 aaKnown RBP30.14■■■□□ 2.42
HLA-C-207ENST00000484378 VAMP7P51809 220 aa30.14■■■□□ 2.42
HLA-C-207ENST00000484378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.14■■■□□ 2.42
HLA-C-207ENST00000484378 GDPD2Q9HCC8 539 aa30.14■■■□□ 2.42
HLA-C-207ENST00000484378 KRT82Q9NSB4 513 aa30.14■■■□□ 2.42
HLA-C-207ENST00000484378 MAPK13O15264 365 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 ASS1P00966 412 aaKnown RBP30.13■■■□□ 2.41
HLA-C-207ENST00000484378 HLA-DRAP01903 254 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 ORC1Q13415 861 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 PUM1Q14671 1186 aaKnown RBP eCLIP30.13■■■□□ 2.41
HLA-C-207ENST00000484378 NFIL3Q16649 462 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 C1orf220Q5T0J3 134 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 SPOPLQ6IQ16 392 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 CEP68Q76N32 757 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 GUF1Q8N442 669 aaKnown RBP30.13■■■□□ 2.41
HLA-C-207ENST00000484378 IMPG2Q9BZV3 1241 aa30.13■■■□□ 2.41
HLA-C-207ENST00000484378 AP1G2O75843 785 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 AKAP3O75969 853 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 ZNF202O95125 648 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 RETP07949 1114 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 PXNP49023 591 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-207ENST00000484378 NDST1P52848 882 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 SLC5A3P53794 718 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 LMNB2Q03252 620 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 RSPO4Q2I0M5 234 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-207ENST00000484378 PAQR9Q6ZVX9 377 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 INTS8Q75QN2 995 aaKnown RBP30.12■■■□□ 2.41
HLA-C-207ENST00000484378 DGLUCYQ7Z3D6 616 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 FUKQ8N0W3 1084 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 OVCA2Q8WZ82 227 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 CCDC34Q96HJ3 373 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 PARD6AQ9NPB6 346 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.12■■■□□ 2.412e-6■■■■■ 149.1
HLA-C-207ENST00000484378 HMGXB4Q9UGU5 601 aa30.12■■■□□ 2.41
HLA-C-207ENST00000484378 ATG2BQ96BY7 2078 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 TRIM49P0CI25 452 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 TRIM49CP0CI26 452 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 MBL2P11226 248 aaPredicted RBP30.11■■■□□ 2.41
HLA-C-207ENST00000484378 KRT13P13646 458 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 CCDC130P13994 396 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 RPL13P26373 211 aaKnown RBP30.11■■■□□ 2.41
HLA-C-207ENST00000484378 ASPAP45381 313 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 SPEM2Q0P670 501 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 FILIP1Q7Z7B0 1213 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 FAM186BQ8IYM0 893 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 RPLP0P6Q8NHW5 317 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 SCAMP5Q8TAC9 235 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 DLL3Q9NYJ7 618 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 CFAP97Q9P2B7 532 aa30.11■■■□□ 2.41
HLA-C-207ENST00000484378 SCAMP3O14828 347 aaKnown RBP30.1■■■□□ 2.41
HLA-C-207ENST00000484378 TRIM21P19474 475 aaKnown RBP30.1■■■□□ 2.41
HLA-C-207ENST00000484378 UNC93AQ86WB7 457 aa30.1■■■□□ 2.41
HLA-C-207ENST00000484378 DDX42Q86XP3 938 aaKnown RBP eCLIP30.1■■■□□ 2.41
HLA-C-207ENST00000484378 KIAA1958Q8N8K9 716 aa30.1■■■□□ 2.41
HLA-C-207ENST00000484378 SLC2A14Q8TDB8 520 aa30.1■■■□□ 2.41
HLA-C-207ENST00000484378 FAM49BQ9NUQ9 324 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms