RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 HPS4Q9NQG7 708 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 SPATA6Q9NWH7 488 aaPredicted RBP13.02□□□□□ -0.33
MSH5-216ENST00000484309 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
MSH5-216ENST00000484309 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
MSH5-216ENST00000484309 PIEZO1Q92508 2521 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 SOBPA7XYQ1 873 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 SPECC1L-ADORA2AF8WAN1 911 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 MAN2B1O00754 1011 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 TNFRSF10BO14763 440 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 RTN3O95197 1032 aaPredicted RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 FAM200BP0CF97 657 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 TRIM21P19474 475 aaKnown RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 CTHP32929 405 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 FMO5P49326 533 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 MRE11P49959 708 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 USP4Q13107 963 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 FZD5Q13467 585 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 MTF1Q14872 753 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 PON2Q15165 354 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 ZNF77Q15935 545 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 CC2D1AQ6P1N0 951 aaPredicted RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 CLEC20AQ6ZU45 233 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 GPRIN1Q7Z2K8 1008 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 FRMD5Q7Z6J6 570 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 CYFIP2Q96F07 1278 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 FAM83CQ9BQN1 747 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 METTL14Q9HCE5 456 aaKnown RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 CISHQ9NSE2 258 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 RBM12Q9NTZ6 932 aaKnown RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 GMIPQ9P107 970 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
MSH5-216ENST00000484309 WNT6Q9Y6F9 365 aa13.01□□□□□ -0.33
MSH5-216ENST00000484309 OTOL1A6NHN0 477 aaPredicted RBP13□□□□□ -0.33
MSH5-216ENST00000484309 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
MSH5-216ENST00000484309 ZXDBP98169 803 aa13□□□□□ -0.33
MSH5-216ENST00000484309 CUL2Q13617 745 aa13□□□□□ -0.33
MSH5-216ENST00000484309 RUNX3Q13761 415 aa13□□□□□ -0.33
MSH5-216ENST00000484309 ITPRIPL2Q3MIP1 535 aa13□□□□□ -0.33
MSH5-216ENST00000484309 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
MSH5-216ENST00000484309 C1orf210Q8IVY1 113 aa13□□□□□ -0.33
MSH5-216ENST00000484309 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
MSH5-216ENST00000484309 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
MSH5-216ENST00000484309 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
MSH5-216ENST00000484309 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
MSH5-216ENST00000484309 NELL2Q99435 816 aa13□□□□□ -0.33
MSH5-216ENST00000484309 HNRNPABQ99729 332 aaKnown RBP13□□□□□ -0.33
MSH5-216ENST00000484309 OSBPL6Q9BZF3 934 aa13□□□□□ -0.33
MSH5-216ENST00000484309 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
MSH5-216ENST00000484309 CLSTN2Q9H4D0 955 aa13□□□□□ -0.33
MSH5-216ENST00000484309 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
MSH5-216ENST00000484309 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
MSH5-216ENST00000484309 COQ4Q9Y3A0 265 aa13□□□□□ -0.33
MSH5-216ENST00000484309 CPQQ9Y646 472 aa13□□□□□ -0.33
MSH5-216ENST00000484309 LEFTY2O00292 366 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 NCAM2O15394 837 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 OAS1P00973 400 aaKnown RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 IFNAR2P48551 515 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 PGFP49763 221 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 RAD23BP54727 409 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 NAIF1Q69YI7 327 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 TSSK4Q6SA08 328 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 RALGPS2Q86X27 583 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 MAML2Q8IZL2 1156 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 CLDN23Q96B33 292 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 TMEM176AQ96HP8 235 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 C8orf33Q9H7E9 229 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 CCSER2Q9H7U1 834 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 CSNK1G1Q9HCP0 422 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 ARHGAP26Q9UNA1 814 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 R4GN57 208 aa12.99□□□□□ -0.33
MSH5-216ENST00000484309 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
MSH5-216ENST00000484309 HHLA1C9JL84 531 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 CYP26A1O43174 497 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 LAMTOR5O43504 91 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 CHRNB1P11230 501 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
MSH5-216ENST00000484309 PPP3CCP48454 512 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 PDE6CP51160 858 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 MTAPQ13126 283 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 Q6ZS52 159 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 OSCP1Q8WVF1 389 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 KAT5Q92993 513 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 CHFRQ96EP1 664 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms