RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 TFDP3Q5H9I0 405 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM182AQ5T1J6 154 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 MRPL10Q7Z7H8 261 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 RTN4RL1Q86UN2 441 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 FUKQ8N0W3 1084 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 B3GALNT2Q8NCR0 500 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 GLT1D1Q96MS3 346 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 FMO2Q99518 471 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 EPB41L4BQ9H329 900 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 SNX25Q9H3E2 840 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ADAM21Q9UKJ8 722 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 DNPEPQ9ULA0 475 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 USP18Q9UMW8 372 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 NFS1Q9Y697 457 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZNF623O75123 536 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 CKBP12277 381 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 VPS41P49754 854 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 GPS2Q13227 327 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 PTK7Q13308 1070 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 PPP1R7Q15435 360 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 STILQ15468 1287 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 CCNG2Q16589 344 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 UPP1Q16831 310 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 POLNQ7Z5Q5 900 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 TOP6BLQ8N6T0 577 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM71BQ8TC56 605 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 DIS3LQ8TF46 1054 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 SENP8Q96LD8 212 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 C10orf88Q9H8K7 445 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 CALCOCO1Q9P1Z2 691 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 HESX1Q9UBX0 185 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ATP8A1Q9Y2Q0 1164 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 A0A1W2PQ45 241 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 A0A1W2PQY0 241 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ITGB1P05556 798 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZSCAN5DPP0CG00 497 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 LCP1P13796 627 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ATXN1P54253 815 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 DYNLT1P63172 113 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC6A3Q01959 620 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 MMRN1Q13201 1228 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 TIGD5Q53EQ6 642 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 TTMPQ5BVD1 217 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CFAP58Q5T655 872 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ALS2CLQ60I27 953 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CD300LGQ6UXG3 332 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CMASQ8NFW8 434 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ATL2Q8NHH9 583 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 HASPINQ8TF76 798 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 HSPH1Q92598 858 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 PWWP2AQ96N64 755 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CNPY3Q9BT09 278 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 MAGEB5Q9BZ81 275 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CRTAC1Q9NQ79 661 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 PLAAQ9Y263 795 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 GIT1Q9Y2X7 761 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 MYBPHLA2RUH7 354 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 MOXD2PA6NHM9 499 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 LIASO43766 372 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 B4GALT3O60512 393 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 PPFIA2O75334 1257 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CABYRO75952 493 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 TJP3O95049 919 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 TRUB2O95900 331 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ETS1P14921 441 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 PTPN1P18031 435 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPD1P21695 349 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 KDELR1P24390 212 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 RPL34P49207 117 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 BST2Q10589 180 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 PIGZQ86VD9 579 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 STK32AQ8WU08 396 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ART4Q93070 314 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ARMC5Q96C12 935 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM204AQ9H8W3 233 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 RSAD1Q9HA92 442 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 DDX43Q9NXZ2 648 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 INPP5FQ9Y2H2 1132 aa9.27□□□□□ -0.93
CDC42SE1-204ENST00000483763 CST8O60676 142 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 HSF2BPO75031 334 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 RNF8O76064 485 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 B3GAT3O94766 335 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KRT7P08729 469 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 IL4RP24394 825 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 NDUFV1P49821 464 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms