RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 HELZP42694 1942 aaKnown RBP16.49■□□□□ 0.23
RPP40-206ENST00000483546 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
RPP40-206ENST00000483546 MED7O43513 233 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 BEST1O76090 585 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 SETSIPP0DME0 302 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 KRT5P13647 590 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 FCARP24071 287 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 AVPR1AP37288 418 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 CYP4F8P98187 520 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 SIGLEC14Q08ET2 396 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 BST2Q10589 180 aaKnown RBP16.49■□□□□ 0.23
RPP40-206ENST00000483546 TAF10Q12962 218 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
RPP40-206ENST00000483546 IQCB1Q15051 598 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 CNGA2Q16280 664 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 SNX30Q5VWJ9 437 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 CMTM8Q8IZV2 173 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 STKLD1Q8NE28 680 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 KHSRPQ92945 711 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPP40-206ENST00000483546 FBXO32Q969P5 355 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 ZSWIM3Q96MP5 696 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 C1QTNF1Q9BXJ1 281 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 SLC2A4RGQ9NR83 387 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 DNAJC12Q9UKB3 198 aa16.49■□□□□ 0.23
RPP40-206ENST00000483546 TRAV19A0A0A6YYK7 116 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 ZNF840PA6NDX5 716 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 HHLA1C9JL84 531 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
RPP40-206ENST00000483546 XPO1O14980 1071 aaKnown RBP16.48■□□□□ 0.23
RPP40-206ENST00000483546 TUBP50607 506 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 GOLGA7BQ2TAP0 167 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 STXBP5Q5T5C0 1151 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 KLHDC7AQ5VTJ3 777 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 DPY19L2P1Q6NXN4 242 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 POTEHQ6S545 545 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 APTXQ7Z2E3 356 aaKnown RBP16.48■□□□□ 0.23
RPP40-206ENST00000483546 ARID3BQ8IVW6 561 aaPredicted RBP16.48■□□□□ 0.23
RPP40-206ENST00000483546 CELF5Q8N6W0 485 aaKnown RBP16.48■□□□□ 0.23
RPP40-206ENST00000483546 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 ERGIC2Q96RQ1 377 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 KXD1Q9BQD3 176 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 SLC46A2Q9BY10 475 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPP40-206ENST00000483546 SCML2Q9UQR0 700 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 MUC3AQ02505 3323 aa16.48■□□□□ 0.23
RPP40-206ENST00000483546 DPYSL4O14531 572 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 USP17L7P0C7H9 530 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 ZDHHC11BP0C7U3 371 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 UCHL3P15374 230 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PSMC3P17980 439 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PLA2G4AP47712 749 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PSEN1P49768 467 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 KIF11P52732 1056 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 BPIFB4P59827 614 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PFKPQ01813 784 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 UBXN1Q04323 297 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 ARHGAP44Q17R89 818 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 FILIP1LQ4L180 1135 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PKDCCQ504Y2 493 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TXNDC8Q6A555 127 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TANGO2Q6ICL3 276 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 GJB7Q6PEY0 223 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TRIM67Q6ZTA4 783 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 PIGZQ86VD9 579 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TTC30AQ86WT1 665 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 MFSD6LQ8IWD5 586 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 KIAA1958Q8N8K9 716 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 SCAMP5Q8TAC9 235 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TFAP2BQ92481 460 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
RPP40-206ENST00000483546 CBX8Q9HC52 389 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 TLR8Q9NR97 1041 aaKnown RBP16.47■□□□□ 0.23
RPP40-206ENST00000483546 WNT16Q9UBV4 365 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 USP3Q9Y6I4 520 aa16.47■□□□□ 0.23
RPP40-206ENST00000483546 KIF26AQ9ULI4 1882 aaPredicted RBP16.47■□□□□ 0.23
RPP40-206ENST00000483546 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 OLFM2O95897 454 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 ATP1A3P13637 1013 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 TCF3P15923 654 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
RPP40-206ENST00000483546 GNA15P30679 374 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 PTK2Q05397 1052 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 PDE4CQ08493 712 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 FCHO2Q0JRZ9 810 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 IFRD2Q12894 506 aaPredicted RBP16.46■□□□□ 0.23
RPP40-206ENST00000483546 RAB41Q5JT25 222 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 FAM71AQ8IYT1 594 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 KCTD13Q8WZ19 329 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 DNASE1L2Q92874 299 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 TRMT61BQ9BVS5 477 aaKnown RBP16.46■□□□□ 0.23
RPP40-206ENST00000483546 NAA15Q9BXJ9 866 aaKnown RBP16.46■□□□□ 0.23
RPP40-206ENST00000483546 STK33Q9BYT3 514 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 EPHX3Q9H6B9 360 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 TRPV5Q9NQA5 729 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 TDP1Q9NUW8 608 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 SIK3Q9Y2K2 1263 aa16.46■□□□□ 0.23
RPP40-206ENST00000483546 TECTAO75443 2155 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 HEPACAM2A8MVW5 462 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms