RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 SP2Q02086 613 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SP4Q02446 784 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 GSTA3Q16772 222 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 PDCD4Q53EL6 469 aaKnown RBP13.04□□□□□ -0.32
LINC00477-201ENST00000483544 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SPOPLQ6IQ16 392 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SCAIQ8N9R8 606 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 FNIP1Q8TF40 1166 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 NKD2Q969F2 451 aaPredicted RBP13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 PRMT1Q99873 361 aaKnown RBP13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SPATA16Q9BXB7 569 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 LHX5Q9H2C1 402 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 SCHIP1Q9P0W5 487 aaPredicted RBP13.04□□□□□ -0.32
LINC00477-201ENST00000483544 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 PTPRJQ12913 1337 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
LINC00477-201ENST00000483544 ANK1P16157 1881 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 B4GALT4O60513 344 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 LGR5O75473 907 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 SUN1O94901 812 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 IL18RAPO95256 599 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ACSL3O95573 720 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ITGAVP06756 1048 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 UBA1P22314 1058 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 CHKAP35790 457 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 TFDP1Q14186 410 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ACAP1Q15027 740 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 MAPK6Q16659 721 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 TFDP3Q5H9I0 405 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ENDOVQ8N8Q3 282 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ATG4AQ8WYN0 398 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 OLFM3Q96PB7 478 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ACO2Q99798 780 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 DDX23Q9BUQ8 820 aaKnown RBP13.03□□□□□ -0.32
LINC00477-201ENST00000483544 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
LINC00477-201ENST00000483544 IGKV6-21A0A0C4DH24 114 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TMEM120BA0PK00 339 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 FAM189A1O60320 539 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SNX3O60493 162 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 MSCO60682 206 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SLC25A27O95847 323 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TNNC2P02585 160 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 KRT1P04264 644 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 KRT7P08729 469 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 WEE2P0C1S8 567 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TSHRP16473 764 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 CALB2P22676 271 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SKIV2L2P42285 1042 aaKnown RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 MAGEA4P43358 317 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SLCO1A2P46721 670 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 WNT7BP56706 349 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TRPC3Q13507 836 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 KYAT1Q16773 422 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 LONRF1Q17RB8 773 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TBC1D1Q86TI0 1168 aaPredicted RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 ALDH16A1Q8IZ83 802 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 DIS3LQ8TF46 1054 aaKnown RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 ANKRD36BP1Q96IX9 119 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 MAGEB18Q96M61 343 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 PCYT2Q99447 389 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 PCDH9Q9HC56 1237 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 ARHGEF3Q9NR81 526 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 CPSF3Q9UKF6 684 aaKnown RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.32
LINC00477-201ENST00000483544 TIMM22Q9Y584 194 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.32
LINC00477-201ENST00000483544 PRKCBP05771 671 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
LINC00477-201ENST00000483544 TUBA1BP68363 451 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 POU5F1BQ06416 359 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 FXNQ16595 210 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 KYNUQ16719 465 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
LINC00477-201ENST00000483544 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.33
LINC00477-201ENST00000483544 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
LINC00477-201ENST00000483544 TUBA1AQ71U36 451 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms