RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 COMMD8Q9NX08 183 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 GTSE1Q9NYZ3 720 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 GCNT4Q9P109 453 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 ARHGAP26Q9UNA1 814 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 CTNND2Q9UQB3 1225 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 COL4A3Q01955 1670 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 GREB1Q4ZG55 1949 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 SHISA7A6NL88 538 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 BMP6P22004 513 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 ADORA2BP29275 332 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 CTHP32929 405 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 NBL1P41271 181 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 SOX9P48436 509 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 IFNAR2P48551 515 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 SLC5A3P53794 718 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 AMPD2Q01433 879 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 TNK2Q07912 1038 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 USP4Q13107 963 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 PAK1Q13153 545 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 RUNX3Q13761 415 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 LRRC32Q14392 662 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 MTF1Q14872 753 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 ZNF77Q15935 545 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 CBWD6Q4V339 395 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 CBWD3Q5JTY5 395 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 CBWD5Q5RIA9 395 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 TTI2Q6NXR4 508 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 SH3RF2Q8TEC5 729 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 SLC35C1Q96A29 364 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 TWNKQ96RR1 684 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 HNRNPABQ99729 332 aaKnown RBP14.71□□□□□ -0.05
VARS-225ENST00000482996 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.05
VARS-225ENST00000482996 IER2Q9BTL4 223 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 LMAN1LQ9HAT1 526 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 OBSL1O75147 1896 aa14.71□□□□□ -0.05
VARS-225ENST00000482996 RIF1Q5UIP0 2472 aaKnown RBP14.7□□□□□ -0.06
VARS-225ENST00000482996 COL4A2P08572 1712 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 FGFR1OPO95684 399 aaKnown RBP14.7□□□□□ -0.06
VARS-225ENST00000482996 GNA14O95837 355 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 TCF3P15923 654 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 MAP3K7CLP57077 242 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 YWHAEP62258 255 aaKnown RBP14.7□□□□□ -0.06
VARS-225ENST00000482996 CETN1Q12798 172 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 CAMK4Q16566 473 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 ZNF687Q8N1G0 1237 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 CPA6Q8N4T0 437 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 OSCP1Q8WVF1 389 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 EXOC4Q96A65 974 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 SMOQ99835 787 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 CHRDQ9H2X0 955 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 FBXO44Q9H4M3 255 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 EBF3Q9H4W6 596 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 CSNK1G1Q9HCP0 422 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 DUS2Q9NX74 493 aaKnown RBP14.7□□□□□ -0.06
VARS-225ENST00000482996 IL37Q9NZH6 218 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 FBXO4Q9UKT5 387 aa14.7□□□□□ -0.06
VARS-225ENST00000482996 PROB1E7EW31 1015 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 TNFRSF10BO14763 440 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 FMO5P49326 533 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 STX17P56962 302 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 SLC7A9P82251 487 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 FZD5Q13467 585 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 ZNF394Q53GI3 561 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 DGKKQ5KSL6 1271 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 HECTD3Q5T447 861 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 TRIM68Q6AZZ1 485 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 ZC3H14Q6PJT7 736 aaKnown RBP14.69□□□□□ -0.06
VARS-225ENST00000482996 ZMIZ2Q8NF64 920 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 SCAMP5Q8TAC9 235 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 WHAMMQ8TF30 809 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 TATDN2Q93075 761 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 ATP2A3Q93084 1043 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 HEXIM2Q96MH2 286 aaKnown RBP14.69□□□□□ -0.06
VARS-225ENST00000482996 HPS4Q9NQG7 708 aa14.69□□□□□ -0.06
VARS-225ENST00000482996 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
VARS-225ENST00000482996 ANAPC1Q9H1A4 1944 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 FAM92AA1XBS5 289 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 LEFTY2O00292 366 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 BEST1O76090 585 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 OAS1P00973 400 aaKnown RBP14.68□□□□□ -0.06
VARS-225ENST00000482996 SP9P0CG40 484 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 MBL2P11226 248 aaPredicted RBP14.68□□□□□ -0.06
VARS-225ENST00000482996 CHRNB1P11230 501 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 ARSAP15289 507 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 TBXAS1P24557 533 aaPredicted RBP14.68□□□□□ -0.06
VARS-225ENST00000482996 MTAPQ13126 283 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 NR1H3Q13133 447 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 CUL2Q13617 745 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 PPP2R5DQ14738 602 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 PON2Q15165 354 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 TXNDC11Q6PKC3 985 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 CLEC20AQ6ZU45 233 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 DDX42Q86XP3 938 aaKnown RBP eCLIP14.68□□□□□ -0.06
VARS-225ENST00000482996 KIAA1958Q8N8K9 716 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 RIN3Q8TB24 985 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms