RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 GAP43P17677 238 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 GARTP22102 1010 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 ANXA13P27216 316 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 SIM1P81133 766 aaPredicted RBP13.69□□□□□ -0.22
TMEM54-206ENST00000482771 SLC7A9P82251 487 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 BYSLQ13895 437 aaKnown RBP13.69□□□□□ -0.22
TMEM54-206ENST00000482771 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 EOGTQ5NDL2 527 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 LARP1BQ659C4 914 aaKnown RBP13.69□□□□□ -0.22
TMEM54-206ENST00000482771 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 DEFB119Q8N690 84 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 ZCCHC14Q8WYQ9 949 aaKnown RBP13.69□□□□□ -0.22
TMEM54-206ENST00000482771 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 SPACA7Q96KW9 195 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 CFAP97Q9P2B7 532 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 SEL1LQ9UBV2 794 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 CPQQ9Y646 472 aa13.69□□□□□ -0.22
TMEM54-206ENST00000482771 ADAM23O75077 832 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 CFIP05156 583 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 ITPKAP23677 461 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 GNL1P36915 607 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 GRIA2P42262 883 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 TNFRSF4P43489 277 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 KIR2DL1P43626 348 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 PPP3CCP48454 512 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 CASP5P51878 434 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 RING1Q06587 406 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 TAF10Q12962 218 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 MAPRE1Q15691 268 aaKnown RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 HSF5Q4G112 596 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 LYSMD4Q5XG99 296 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 LIMS2Q7Z4I7 341 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 PIP4P1Q86T03 277 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 C12orf40Q86WS4 652 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 KIAA1958Q8N8K9 716 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 DNAJC19Q96DA6 116 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 CEP295NLQ96MC4 621 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 MMS19Q96T76 1030 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 GTPBP2Q9BX10 602 aaKnown RBP13.68□□□□□ -0.22
TMEM54-206ENST00000482771 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 INTS13Q9NVM9 706 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 EHD2Q9NZN4 543 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 CCDC39Q9UFE4 941 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 PILRBQ9UKJ0 227 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 KLK13Q9UKR3 277 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 MYOFQ9NZM1 2061 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 SPEGQ15772 3267 aa13.68□□□□□ -0.22
TMEM54-206ENST00000482771 OBSL1O75147 1896 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 ANAPC1Q9H1A4 1944 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 TCRBV21S2A2A0A5A6 115 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 TBC1D3BA6NDS4 549 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 F8VP50 259 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 PRPF6O94906 941 aaKnown RBP13.67□□□□□ -0.22
TMEM54-206ENST00000482771 ADH1CP00326 375 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
TMEM54-206ENST00000482771 IDEP14735 1019 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
TMEM54-206ENST00000482771 KDSRQ06136 332 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 RESTQ13127 1097 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 SEMA3BQ13214 749 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 DUOXA2Q1HG44 320 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 SPDYCQ5MJ68 293 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
TMEM54-206ENST00000482771 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 NAT16Q8N8M0 369 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 PCED1BQ96HM7 432 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 SLC6A14Q9UN76 642 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 DMXL2Q8TDJ6 3036 aa13.67□□□□□ -0.22
TMEM54-206ENST00000482771 ATXN2Q99700 1313 aaKnown RBP13.66□□□□□ -0.22
TMEM54-206ENST00000482771 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 UPK3BL1B0FP48 263 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 UPK3BL2E5RIL1 263 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 TRIM66O15016 1216 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 TNNC2P02585 160 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
TMEM54-206ENST00000482771 ADH5P11766 374 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
TMEM54-206ENST00000482771 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
TMEM54-206ENST00000482771 DPP6P42658 865 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 FAM193AP78312 1265 aa13.66□□□□□ -0.22
TMEM54-206ENST00000482771 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
TMEM54-206ENST00000482771 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms