RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ARHGEF40Q8TER5 1519 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 ATP10BO94823 1461 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 YEATS2Q9ULM3 1422 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 TTC37Q6PGP7 1564 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 DNAJC9-AS1A6NH13 148 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 INO80B-WBP1J3KQ70 363 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SMIM22K7EJ46 135 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 NPSP0C0P6 89 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 ENGP17813 658 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SLC11A2P49281 568 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 PDE6CP51160 858 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 TPTEP56180 551 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 WNT3P56703 355 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 GRM3Q14832 879 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SAFBQ15424 915 aaKnown RBP eCLIP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 PCID2Q5JVF3 399 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SYCP2LQ5T4T6 812 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 C11orf96Q7Z7L8 435 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SAMD3Q8N6K7 520 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 DNAJC5GQ8N7S2 189 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 KBTBD7Q8WVZ9 684 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 XAGE5Q8WWM1 108 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SMG7Q92540 1137 aaKnown RBP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 DPF1Q92782 380 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 PMM1Q92871 262 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 GLG1Q92896 1179 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 TIFAQ96CG3 184 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 MRGPRX1Q96LB2 322 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 TAAR9Q96RI9 348 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 MPHOSPH6Q99547 160 aaKnown RBP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 ACO2Q99798 780 aaKnown RBP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 INO80BQ9C086 356 aaPredicted RBP4.53□□□□□ -1.68
GTF3A-207ENST00000482655 ZSCAN32Q9NX65 697 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SERGEFQ9UGK8 458 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 SSX2IPQ9Y2D8 614 aa4.53□□□□□ -1.68
GTF3A-207ENST00000482655 A1L4Q6 167 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 WIPF3A6NGB9 483 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 CGB1A6NKQ9 187 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 hCG_1984214I3L0E3 225 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 CELA2AP08217 269 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 PHKG2P15735 406 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 COBLL1Q53SF7 1204 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 DEPDC1Q5TB30 811 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 PARS2Q7L3T8 475 aaKnown RBP4.52□□□□□ -1.69
GTF3A-207ENST00000482655 MPP5Q8N3R9 675 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 SLC15A4Q8N697 577 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 ZBTB34Q8NCN2 500 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 PJA1Q8NG27 643 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 OR6B3Q8NGW1 331 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
GTF3A-207ENST00000482655 OSCP1Q8WVF1 389 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 DUSP22Q9NRW4 184 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 TRMT13Q9NUP7 481 aaKnown RBP4.52□□□□□ -1.69
GTF3A-207ENST00000482655 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 FLRT1Q9NZU1 646 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 RNF7Q9UBF6 113 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 MRPS17Q9Y2R5 130 aaKnown RBP4.52□□□□□ -1.69
GTF3A-207ENST00000482655 RIPOR2Q9Y4F9 1068 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 KIF27Q86VH2 1401 aa4.52□□□□□ -1.69
GTF3A-207ENST00000482655 ANO9A1A5B4 782 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 FAM227AF5H4B4 570 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 PHGDHO43175 533 aaKnown RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 EIF3JO75822 258 aaKnown RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 DLDP09622 509 aaKnown RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 CERS1P27544 350 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 ATXN1P54253 815 aaKnown RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 PRKAG1P54619 331 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 GPSM2P81274 684 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 SP2Q02086 613 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 TFF2Q03403 129 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 MYO1EQ12965 1108 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 RAB32Q13637 225 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 ANO6Q4KMQ2 910 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 SLC44A4Q53GD3 710 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 PRAMEF17Q5VTA0 474 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 B3GNT9Q6UX72 402 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 NAPRTQ6XQN6 538 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 ZNF782Q6ZMW2 699 aaPredicted RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 COL23A1Q86Y22 540 aaPredicted RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 VGLL2Q8N8G2 317 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 DPCDQ9BVM2 203 aaPredicted RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 TRIM54Q9BYV2 358 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 SEMA4CQ9C0C4 833 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 CXorf36Q9H7Y0 433 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 NRIP3Q9NQ35 241 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 DDX20Q9UHI6 824 aaKnown RBP4.51□□□□□ -1.69
GTF3A-207ENST00000482655 ADAMTS5Q9UNA0 930 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 ARHGEF12Q9NZN5 1544 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 PREX1Q8TCU6 1659 aa4.51□□□□□ -1.69
GTF3A-207ENST00000482655 FER1L4A9Z1Z3 1794 aa4.5□□□□□ -1.69
GTF3A-207ENST00000482655 ALKQ9UM73 1620 aa4.5□□□□□ -1.69
GTF3A-207ENST00000482655 NEO1Q92859 1461 aa4.5□□□□□ -1.69
GTF3A-207ENST00000482655 MED1Q15648 1581 aaPredicted RBP4.5□□□□□ -1.69
GTF3A-207ENST00000482655 A0A087WWL8 130 aa4.5□□□□□ -1.69
GTF3A-207ENST00000482655 BTN3A1O00481 513 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms