RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 NFIL3Q16649 462 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 SGSM1Q2NKQ1 1148 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ZNF667Q5HYK9 610 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CC2D1AQ6P1N0 951 aaPredicted RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 KRBA2Q6ZNG9 492 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 DENND5BQ6ZUT9 1274 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 SPEM1Q8N4L4 309 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 MYLPFQ96A32 169 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CCDC34Q96HJ3 373 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ZFYVE19Q96K21 471 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 C8orf48Q96LL4 319 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 FKBPLQ9UIM3 349 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 FRMD4BQ9Y2L6 1034 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ZNF638Q14966 1978 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 GREB1Q4ZG55 1949 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 OBSL1O75147 1896 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TRAV19A0A0A6YYK7 116 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 LRRIQ3A6PVS8 624 aaPredicted RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 A8MXQ7 604 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 TADA3O75528 432 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 ZNF202O95125 648 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TCF3P15923 654 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 HDCP19113 662 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 RPL13P26373 211 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 CASP4P49662 377 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ENPEPQ07075 957 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 DPYDQ12882 1025 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 BIRC3Q13489 604 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 NCOA4Q13772 614 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 KCNB1Q14721 858 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 PDGFRLQ15198 375 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CCDC142Q17RM4 750 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ZACNQ401N2 412 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TDRD10Q5VZ19 366 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 TXNDC11Q6PKC3 985 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 KIAA1958Q8N8K9 716 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 SUMF1Q8NBK3 374 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 STKLD1Q8NE28 680 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 PLEKHO2Q8TD55 490 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 RUBCNQ92622 972 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TAF4BQ92750 862 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TNIP3Q96KP6 325 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CYP2S1Q96SQ9 504 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 TTLL2Q9BWV7 592 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 ELOVL4Q9GZR5 314 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
CCNC-204ENST00000482541 ALG2Q9H553 416 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 CCL26Q9Y258 94 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 NME7Q9Y5B8 376 aa8.26□□□□□ -1.09
CCNC-204ENST00000482541 F8VP50 259 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 TRDMT1O14717 391 aaKnown RBP8.25□□□□□ -1.09
CCNC-204ENST00000482541 PAPSS2O95340 614 aaPredicted RBP8.25□□□□□ -1.09
CCNC-204ENST00000482541 CKMP06732 381 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 P4HA1P13674 534 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 SOX9P48436 509 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 MMP16P51512 607 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 VAMP7P51809 220 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 DLG4P78352 724 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 TNK2Q07912 1038 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 CCINQ13939 588 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 BECN1Q14457 450 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 ZNF699Q32M78 642 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 MDH1BQ5I0G3 518 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 CEP135Q66GS9 1140 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 TSSK4Q6SA08 328 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 GUF1Q8N442 669 aaKnown RBP8.25□□□□□ -1.09
CCNC-204ENST00000482541 ARL14EPQ8N8R7 260 aaPredicted RBP8.25□□□□□ -1.09
CCNC-204ENST00000482541 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 EXOC4Q96A65 974 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 CHAMP1Q96JM3 812 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 EBF3Q9H4W6 596 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 HPS4Q9NQG7 708 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 TRPM5Q9NZQ8 1165 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 GCNT4Q9P109 453 aa8.25□□□□□ -1.09
CCNC-204ENST00000482541 PTPRDP23468 1912 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 ANAPC1Q9H1A4 1944 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 KIF26AQ9ULI4 1882 aaPredicted RBP8.24□□□□□ -1.09
CCNC-204ENST00000482541 F5P12259 2224 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 C2orf78A6NCI8 922 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 ZNF840PA6NDX5 716 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 VNN1O95497 513 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 TDGF1P13385 188 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 HOXA6P31267 233 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 CNR2P34972 360 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 CDH8P55286 799 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
CCNC-204ENST00000482541 NUCB2P80303 420 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 GRSF1Q12849 480 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCNC-204ENST00000482541 NR1H3Q13133 447 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 GAS6Q14393 721 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 MTF1Q14872 753 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 PON2Q15165 354 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 TMEM196Q5HYL7 178 aa8.24□□□□□ -1.09
CCNC-204ENST00000482541 INTS8Q75QN2 995 aaKnown RBP8.24□□□□□ -1.09
CCNC-204ENST00000482541 UNC93AQ86WB7 457 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms