RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ICA1Q05084 483 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 ITIH3Q06033 890 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 MAPKAPK3Q16644 382 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 PFKFB4Q16877 469 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 ARHGAP15Q53QZ3 475 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.77□□□□□ -1.33
SF3B1-210ENST00000482158 CERCAMQ5T4B2 595 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 SMCR8Q8TEV9 937 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-210ENST00000482158 C17orf80Q9BSJ5 609 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 ZBTB26Q9HCK0 441 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 OBP2BQ9NPH6 170 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 CASS4Q9NQ75 786 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 SYBUQ9NX95 663 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 DKK3Q9UBP4 350 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 TESQ9UGI8 421 aaKnown RBP6.77□□□□□ -1.33
SF3B1-210ENST00000482158 AQP12BA6NM10 295 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 YY2O15391 372 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 PIP5K1CO60331 668 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 VNN1O95497 513 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 TYRP1P17643 537 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 NXPH1P58417 271 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 FSTL1Q12841 308 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 ELF2Q15723 593 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 SLC5A9Q2M3M2 681 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 FAXCQ5TGI0 409 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 IZUMO1Q8IYV9 350 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 NKAPQ8N5F7 415 aaKnown RBP6.76□□□□□ -1.33
SF3B1-210ENST00000482158 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 OSCP1Q8WVF1 389 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 GLG1Q92896 1179 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 SLC25A32Q9H2D1 315 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 DNAJB11Q9UBS4 358 aa6.76□□□□□ -1.33
SF3B1-210ENST00000482158 OR2W5A6NFC9 320 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 NPIPB8E9PQR5 432 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 PRRG2O14669 202 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 MATN3O15232 486 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 CSTBP04080 98 aaKnown RBP6.75□□□□□ -1.33
SF3B1-210ENST00000482158 NTSR1P30989 418 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 CHKAP35790 457 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 LIPAP38571 399 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 HALP42357 657 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 EIF2B5Q13144 721 aaKnown RBP6.75□□□□□ -1.33
SF3B1-210ENST00000482158 PTPRRQ15256 657 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 ZACNQ401N2 412 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 INO80DQ53TQ3 878 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-210ENST00000482158 SLC9A4Q6AI14 798 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 MRNIPQ6NTE8 343 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 Q6ZPA2 131 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 KRT73Q86Y46 540 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 CERS3Q8IU89 383 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 STYXQ8WUJ0 223 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 LINC00476Q8WZB0 136 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 RFKQ969G6 155 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 FKBP10Q96AY3 582 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 ZDHHC12Q96GR4 267 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 PGBD1Q96JS3 809 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 TMEM8AQ9HCN3 771 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 KLC4Q9NSK0 619 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 NCANO14594 1321 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 MAST3O60307 1309 aa6.75□□□□□ -1.33
SF3B1-210ENST00000482158 A1L4Q6 167 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PIP5K1BO14986 540 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 COQ9O75208 318 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 SKAP2O75563 359 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PCSK6P29122 969 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PRKAR1BP31321 381 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 SLC5A2P31639 672 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 BUD31P41223 144 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-210ENST00000482158 FOLR3P41439 243 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PGDP52209 483 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 TIRAPP58753 221 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 BLMHQ13867 455 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PTK2BQ14289 1009 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 PTPAQ15257 358 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 TBCCQ15814 346 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 CCDC38Q502W7 563 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 MZT2AQ6P582 158 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 Q6ZNX1 250 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 VRK3Q8IV63 474 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 CACNA2D3Q8IZS8 1091 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 SOCS4Q8WXH5 440 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-210ENST00000482158 RIMKLBQ9ULI2 386 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 SCAF8Q9UPN6 1271 aaKnown RBP6.74□□□□□ -1.33
SF3B1-210ENST00000482158 DTNAQ9Y4J8 743 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
SF3B1-210ENST00000482158 GRID2IPA4D2P6 1211 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 SLC16A3O15427 465 aaKnown RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 MPPED1O15442 326 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 TLR5O60602 858 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 CHRM2P08172 466 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 INSRRP14616 1297 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 IDEP14735 1019 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms