RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 HSPH1Q92598 858 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 ADAM33Q9BZ11 813 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 WHRNQ9P202 907 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 ASIC3Q9UHC3 531 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 UBQLN1Q9UMX0 589 aaKnown RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 CLDN5O00501 218 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 TRPA1O75762 1119 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 CHN1P15882 459 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 DRD4P21917 467 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 TKTP29401 623 aaKnown RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 MAN1A1P33908 653 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 CHKAP35790 457 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 MAP2K2P36507 400 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 THPOP40225 353 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 ICE2Q659A1 982 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 LCLAT1Q6UWP7 414 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 C3orf58Q8NDZ4 430 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 LRRN4Q8WUT4 740 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 SELENOSQ9BQE4 189 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 STRIP2Q9ULQ0 834 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 MGEA5O60502 916 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 MIPP30301 263 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 ATXN1P54253 815 aaKnown RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 LILRA4P59901 499 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 CDC42EP1Q00587 391 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 MMRN1Q13201 1228 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 PIGHQ14442 188 aaPredicted RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 SYDE1Q6ZW31 735 aaPredicted RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 OSTM1Q86WC4 334 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 P3H4Q92791 437 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 THSD7BQ9C0I4 1608 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 SMIM23A6NLE4 172 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 I3L4J1 428 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 RASGRF2O14827 1237 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 MAP3K6O95382 1288 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 GNAT1P11488 350 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 IVDP26440 423 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 CD52P31358 61 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 HNRNPH1P31943 449 aaKnown RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 CDKN2BP42772 138 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 IRF5Q13568 498 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 MCRS1Q96EZ8 462 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
CHD3-211ENST00000481999 GPATCH2LQ9NWQ4 482 aa15.15■□□□□ 0.02
CHD3-211ENST00000481999 GOLGA6L7A0A1B0GV03 622 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 BEST1O76090 585 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 MYCP01106 439 aaPredicted RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 MTM1Q13496 603 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 PKDCCQ504Y2 493 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 HASPINQ8TF76 798 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 RXFP2Q8WXD0 754 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 TMEM121Q9BTD3 319 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 SENP6Q9GZR1 1112 aaPredicted RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 ADAM7Q9H2U9 754 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 FAM105AQ9NUU6 356 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 hCG_1818297A0A087WSY0 165 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 CASTOR2A6NHX0 329 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 F8W810 466 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 PAPSS1O43252 624 aaPredicted RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 STAU1O95793 577 aaKnown RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 ITIH2P19823 946 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 CLCNKBP51801 687 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 TNFAIP8L3Q5GJ75 292 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 KIAA0319Q5VV43 1072 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 TAOK1Q7L7X3 1001 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 SERINC5Q86VE9 423 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 CCDC13Q8IYE1 715 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 LRRC52Q8N7C0 313 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 ATXN2LQ8WWM7 1075 aaKnown RBP15.14■□□□□ 0.01
CHD3-211ENST00000481999 AAASQ9NRG9 546 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 DERAQ9Y315 318 aa15.14■□□□□ 0.01
CHD3-211ENST00000481999 LCP1P13796 627 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 PDGFRAP16234 1089 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 AXLP30530 894 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 GABRB2P47870 512 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 SCNN1GP51170 649 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 CYP4V2Q6ZWL3 525 aaPredicted RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 NIPA2Q8N8Q9 360 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 EPS8L3Q8TE67 593 aaKnown RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 GRK7Q8WTQ7 553 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 SLC35F5Q8WV83 523 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHD3-211ENST00000481999 ZNF317Q96PQ6 595 aaPredicted RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 INTS9Q9NV88 658 aaKnown RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 VGLL3A8MV65 326 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms