RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 BPIFB1Q8TDL5 484 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 NELL1Q92832 810 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 HPS3Q969F9 1004 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 ZNF560Q96MR9 790 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CBWD1Q9BRT8 395 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 STRA6Q9BX79 667 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 EPC1Q9H2F5 836 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 TASP1Q9H6P5 420 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PANK4Q9NVE7 773 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 C2orf42Q9NWW7 574 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 SEL1LQ9UBV2 794 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 DMXL2Q8TDJ6 3036 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 DOCK6Q96HP0 2047 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 FBN3Q75N90 2809 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 MYBPHLA2RUH7 354 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 CHURC1-FNTBB4DL54 471 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 HUS1O60921 280 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 TDGF1P13385 188 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 AVPR1AP37288 418 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 PNPLA4P41247 253 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 FNTBP49356 437 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 ATXN1P54253 815 aaKnown RBP9.66□□□□□ -0.86
HLA-B-253ENST00000481849 NRLP54845 237 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 DDR2Q16832 855 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 TXNDC8Q6A555 127 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 TRIM68Q6AZZ1 485 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 OSTM1Q86WC4 334 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 TMEFF1Q8IYR6 380 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 CSGALNACT2Q8N6G5 542 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 C1orf127Q8N9H9 656 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 SPPL2BQ8TCT7 592 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 FOXD4L4Q8WXT5 416 aaPredicted RBP9.66□□□□□ -0.86
HLA-B-253ENST00000481849 MTMR12Q9C0I1 747 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 C8orf33Q9H7E9 229 aaPredicted RBP9.66□□□□□ -0.86
HLA-B-253ENST00000481849 PDE11AQ9HCR9 933 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 THG1LQ9NWX6 298 aaKnown RBP9.66□□□□□ -0.86
HLA-B-253ENST00000481849 DDX43Q9NXZ2 648 aaKnown RBP9.66□□□□□ -0.86
HLA-B-253ENST00000481849 HSFX1Q9UBD0 423 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 GMEB2Q9UKD1 530 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 GTF3C4Q9UKN8 822 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 RAB23Q9ULC3 237 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 L1RE1Q9UN81 338 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 MTMR6Q9Y217 621 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 CCL26Q9Y258 94 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 SNX9Q9Y5X1 595 aa9.66□□□□□ -0.86
HLA-B-253ENST00000481849 OIP5O43482 229 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 EXTL3O43909 919 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 TMEM191BP0C7N4 346 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 CYP2F1P24903 491 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 NLRP12P59046 1061 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 SIM2Q14190 667 aaPredicted RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 STK38Q15208 465 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 ITPRIPL2Q3MIP1 535 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 TMEM150AQ86TG1 271 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 RALGPS2Q86X27 583 aaPredicted RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 SCN4BQ8IWT1 228 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 CCDC65Q8IXS2 484 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 CMTM8Q8IZV2 173 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 SPEM1Q8N4L4 309 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 CELF5Q8N6W0 485 aaKnown RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 C2orf15Q8WU43 125 aaKnown RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 MSANTD3Q96H12 275 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 IER2Q9BTL4 223 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 FAM126AQ9BYI3 521 aaPredicted RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 EBF3Q9H4W6 596 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 TRPC7Q9HCX4 862 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 PARD6AQ9NPB6 346 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 OLFML3Q9NRN5 406 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 GKN1Q9NS71 199 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 OBP2AQ9NY56 170 aa9.65□□□□□ -0.86
HLA-B-253ENST00000481849 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
HLA-B-253ENST00000481849 LAMA5O15230 3695 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 PTPRJQ12913 1337 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 STX6O43752 255 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 LDHAP00338 332 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 PROS1P07225 676 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 ARSAP15289 507 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 HMGA1P17096 107 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 GARTP22102 1010 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 PXNP49023 591 aaPredicted RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 MLLT6P55198 1093 aaPredicted RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 PSMC1P62191 440 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 RBP5P82980 135 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 MYL7Q01449 175 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 POU5F1Q01860 360 aaKnown RBP9.64□□□□□ -0.87
HLA-B-253ENST00000481849 SMARCB1Q12824 385 aa9.64□□□□□ -0.87
HLA-B-253ENST00000481849 RUNX3Q13761 415 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms