RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ADALQ6DHV7 355 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 KRT80Q6KB66 452 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 TRAT1Q6PIZ9 186 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.65□□□□□ -1.03
LSM5-210ENST00000480956 FAM90A1Q86YD7 464 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 GLB1L2Q8IW92 636 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 NAT16Q8N8M0 369 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 CTCFLQ8NI51 663 aaPredicted RBP8.65□□□□□ -1.03
LSM5-210ENST00000480956 IFI44Q8TCB0 444 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 SEPT1Q8WYJ6 367 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 CPT1BQ92523 772 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 ACDQ96AP0 544 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 FAM105AQ9NUU6 356 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 ACTR3BQ9P1U1 418 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 CGNQ9P2M7 1197 aaKnown RBP8.65□□□□□ -1.03
LSM5-210ENST00000480956 KCND3Q9UK17 655 aa8.65□□□□□ -1.03
LSM5-210ENST00000480956 AJAP1Q9UKB5 411 aaPredicted RBP8.65□□□□□ -1.03
LSM5-210ENST00000480956 NPIPB15A6NHN6 443 aaPredicted RBP8.64□□□□□ -1.03
LSM5-210ENST00000480956 IGF2BP3O00425 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
LSM5-210ENST00000480956 TP73O15350 636 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 PHF2O75151 1096 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 PALMO75781 387 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 FTCDO95954 541 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 TFRCP02786 760 aaKnown RBP8.64□□□□□ -1.03
LSM5-210ENST00000480956 SPARCP09486 303 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 MYBL1P10243 752 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 SAT1P21673 171 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 LTKP29376 864 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 PBLDP30039 288 aaPredicted RBP8.64□□□□□ -1.03
LSM5-210ENST00000480956 KBTBD12Q3ZCT8 623 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 KRBOX4Q5JUW0 171 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 CHST3Q7LGC8 479 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 RBM12BQ8IXT5 1001 aaKnown RBP8.64□□□□□ -1.03
LSM5-210ENST00000480956 CCDC105Q8IYK2 499 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 SHC3Q92529 594 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 CDADC1Q9BWV3 514 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 KLHL4Q9C0H6 718 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 PFDN4Q9NQP4 134 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 PCSK1NQ9UHG2 260 aa8.64□□□□□ -1.03
LSM5-210ENST00000480956 RGSL1A5PLK6 1076 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 DYRK3O43781 588 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 NTSR2O95665 410 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SYPP08247 313 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 KLRK1P26718 216 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 BSGP35613 385 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 RGS3P49796 1198 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 HTD2P86397 168 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CAMK2DQ13557 499 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 LASP1Q14847 261 aaKnown RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 SHROOM1Q2M3G4 852 aaPredicted RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CYP2R1Q6VVX0 501 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 TMEM110Q86TL2 294 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 TUSC5Q8IXB3 177 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SPATA20Q8TB22 786 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 CDCA5Q96FF9 252 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CNDP1Q96KN2 507 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 FOXB1Q99853 325 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 C1orf43Q9BWL3 253 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 KRT23Q9C075 422 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 AP5M1Q9H0R1 490 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 IL21RQ9HBE5 538 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 HOXC10Q9NYD6 342 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 TELO2Q9Y4R8 837 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 POMT1Q9Y6A1 747 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 PRAMEF22A3QJZ6 481 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 TMEM233B4DJY2 109 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 K7EPI3 171 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SLC27A2O14975 620 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 STX6O43752 255 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 NRP2O60462 931 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 OPHN1O60890 802 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CKBP12277 381 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 DRD2P14416 443 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 ADH6P28332 368 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SERPINA4P29622 427 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SLC6A9P48067 706 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 HSD17B4P51659 736 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 PTP4A2Q12974 167 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 RPA4Q13156 261 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 SMAD4Q13485 552 aaKnown RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 FAM129CQ86XR2 697 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 CCDC114Q96M63 670 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 MDFIQ99750 246 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 VPS37BQ9H9H4 285 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 ZDHHC7Q9NXF8 308 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 RGS17Q9UGC6 210 aaPredicted RBP8.63□□□□□ -1.03
LSM5-210ENST00000480956 ACTL7BQ9Y614 415 aa8.63□□□□□ -1.03
LSM5-210ENST00000480956 TRAV34A0A0B4J273 112 aa8.62□□□□□ -1.03
LSM5-210ENST00000480956 A8MVJ9 347 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms