RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ZMIZ2Q8NF64 920 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 SCAMP5Q8TAC9 235 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 FAM3CQ92520 227 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 IRF2BPLQ9H1B7 796 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 GKN1Q9NS71 199 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 GTSE1Q9NYZ3 720 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 DLGAP2Q9P1A6 1054 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 NDRG2Q9UN36 371 aaKnown RBP21.34■■□□□ 1.01
VPS36-204ENST00000480923 NUP210Q8TEM1 1887 aaPredicted RBP21.34■■□□□ 1.01
VPS36-204ENST00000480923 PTPRDP23468 1912 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 TNFRSF10BO14763 440 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 NCAM2O15394 837 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 CCDC192P0DO97 292 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 GLULP15104 373 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 SOX9P48436 509 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 YWHAEP62258 255 aaKnown RBP21.33■■□□□ 1.01
VPS36-204ENST00000480923 TNK2Q07912 1038 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 TRIM59Q8IWR1 403 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 OVCA2Q8WZ82 227 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 ATOH1Q92858 354 aaPredicted RBP21.33■■□□□ 1.01
VPS36-204ENST00000480923 JAKMIP2Q96AA8 810 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 TMEM176AQ96HP8 235 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 C8orf33Q9H7E9 229 aaPredicted RBP21.33■■□□□ 1.01
VPS36-204ENST00000480923 CSNK1G1Q9HCP0 422 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 COMMD8Q9NX08 183 aa21.33■■□□□ 1.01
VPS36-204ENST00000480923 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.33■■□□□ 1.01
VPS36-204ENST00000480923 SHISA7A6NL88 538 aa21.32■■□□□ 1
VPS36-204ENST00000480923 PFKLP17858 780 aa21.32■■□□□ 1
VPS36-204ENST00000480923 MARSP56192 900 aaKnown RBP21.32■■□□□ 1
VPS36-204ENST00000480923 MTF1Q14872 753 aa21.32■■□□□ 1
VPS36-204ENST00000480923 ITPRIPL2Q3MIP1 535 aa21.32■■□□□ 1
VPS36-204ENST00000480923 PPP1R26Q5T8A7 1209 aaPredicted RBP21.32■■□□□ 1
VPS36-204ENST00000480923 CLEC20AQ6ZU45 233 aa21.32■■□□□ 1
VPS36-204ENST00000480923 CREBRFQ8IUR6 639 aa21.32■■□□□ 1
VPS36-204ENST00000480923 SLC4A11Q8NBS3 891 aa21.32■■□□□ 1
VPS36-204ENST00000480923 RIN3Q8TB24 985 aa21.32■■□□□ 1
VPS36-204ENST00000480923 SH3RF2Q8TEC5 729 aa21.32■■□□□ 1
VPS36-204ENST00000480923 MSANTD3Q96H12 275 aa21.32■■□□□ 1
VPS36-204ENST00000480923 NT5C1BQ96P26 610 aa21.32■■□□□ 1
VPS36-204ENST00000480923 FAM124BQ9H5Z6 455 aaPredicted RBP21.32■■□□□ 1
VPS36-204ENST00000480923 FAM86C1Q9NVL1 165 aa21.32■■□□□ 1
VPS36-204ENST00000480923 CHORDC1Q9UHD1 332 aaPredicted RBP21.32■■□□□ 1
VPS36-204ENST00000480923 ARHGAP26Q9UNA1 814 aa21.32■■□□□ 1
VPS36-204ENST00000480923 PMM2O15305 246 aa21.31■■□□□ 1
VPS36-204ENST00000480923 P4HA2O15460 535 aa21.31■■□□□ 1
VPS36-204ENST00000480923 AFPP02771 609 aaKnown RBP21.31■■□□□ 1
VPS36-204ENST00000480923 TBXAS1P24557 533 aaPredicted RBP21.31■■□□□ 1
VPS36-204ENST00000480923 RAD23BP54727 409 aa21.31■■□□□ 1
VPS36-204ENST00000480923 MLLT6P55198 1093 aaPredicted RBP21.31■■□□□ 1
VPS36-204ENST00000480923 KCNH2Q12809 1159 aa21.31■■□□□ 1
VPS36-204ENST00000480923 USP4Q13107 963 aa21.31■■□□□ 1
VPS36-204ENST00000480923 ANGPT1Q15389 498 aa21.31■■□□□ 1
VPS36-204ENST00000480923 ZNF77Q15935 545 aa21.31■■□□□ 1
VPS36-204ENST00000480923 TRIM68Q6AZZ1 485 aa21.31■■□□□ 1
VPS36-204ENST00000480923 FAM83CQ9BQN1 747 aa21.31■■□□□ 1
VPS36-204ENST00000480923 FBXO44Q9H4M3 255 aa21.31■■□□□ 1
VPS36-204ENST00000480923 EBF3Q9H4W6 596 aa21.31■■□□□ 1
VPS36-204ENST00000480923 IL37Q9NZH6 218 aa21.31■■□□□ 1
VPS36-204ENST00000480923 GMIPQ9P107 970 aa21.31■■□□□ 1
VPS36-204ENST00000480923 MUC6Q6W4X9 2439 aa21.3■■□□□ 1
VPS36-204ENST00000480923 SPECC1L-ADORA2AF8WAN1 911 aa21.3■■□□□ 1
VPS36-204ENST00000480923 IFNAR2P48551 515 aa21.3■■□□□ 1
VPS36-204ENST00000480923 RUNX3Q13761 415 aa21.3■■□□□ 1
VPS36-204ENST00000480923 TPD52L1Q16890 204 aaPredicted RBP21.3■■□□□ 1
VPS36-204ENST00000480923 C1orf228Q6PIY5 440 aa21.3■■□□□ 1
VPS36-204ENST00000480923 RALGPS2Q86X27 583 aaPredicted RBP21.3■■□□□ 1
VPS36-204ENST00000480923 CNOT6LQ96LI5 555 aaKnown RBP21.3■■□□□ 1
VPS36-204ENST00000480923 RNF38Q9H0F5 515 aa21.3■■□□□ 1
VPS36-204ENST00000480923 SPATA6Q9NWH7 488 aaPredicted RBP21.3■■□□□ 1
VPS36-204ENST00000480923 SMPD4Q9NXE4 827 aa21.3■■□□□ 1
VPS36-204ENST00000480923 OBSL1O75147 1896 aa21.3■■□□□ 1
VPS36-204ENST00000480923 COL4A2P08572 1712 aa21.29■■□□□ 1
VPS36-204ENST00000480923 OAS1P00973 400 aaKnown RBP21.29■■□□□ 1
VPS36-204ENST00000480923 MBL2P11226 248 aaPredicted RBP21.29■■□□□ 1
VPS36-204ENST00000480923 ARSAP15289 507 aa21.29■■□□□ 1
VPS36-204ENST00000480923 ACO1P21399 889 aaKnown RBP21.29■■□□□ 1
VPS36-204ENST00000480923 CTHP32929 405 aa21.29■■□□□ 1
VPS36-204ENST00000480923 MAGEA9P43362 315 aa21.29■■□□□ 1
VPS36-204ENST00000480923 SLC7A9P82251 487 aa21.29■■□□□ 1
VPS36-204ENST00000480923 PDGFRLQ15198 375 aa21.29■■□□□ 1
VPS36-204ENST00000480923 DPCR1Q3MIW9 517 aa21.29■■□□□ 1
VPS36-204ENST00000480923 HECTD3Q5T447 861 aa21.29■■□□□ 1
VPS36-204ENST00000480923 GPRIN1Q7Z2K8 1008 aa21.29■■□□□ 1
VPS36-204ENST00000480923 C1orf210Q8IVY1 113 aa21.29■■□□□ 1
VPS36-204ENST00000480923 PPM1KQ8N3J5 372 aa21.29■■□□□ 1
VPS36-204ENST00000480923 OSCP1Q8WVF1 389 aa21.29■■□□□ 1
VPS36-204ENST00000480923 CLDN23Q96B33 292 aa21.29■■□□□ 1
VPS36-204ENST00000480923 MED15Q96RN5 788 aa21.29■■□□□ 1
VPS36-204ENST00000480923 DUSP16Q9BY84 665 aa21.29■■□□□ 1
VPS36-204ENST00000480923 HPS4Q9NQG7 708 aa21.29■■□□□ 1
VPS36-204ENST00000480923 DUS2Q9NX74 493 aaKnown RBP21.29■■□□□ 1
VPS36-204ENST00000480923 CPQQ9Y646 472 aa21.29■■□□□ 1
VPS36-204ENST00000480923 WNT6Q9Y6F9 365 aa21.29■■□□□ 1
VPS36-204ENST00000480923 TICRRQ7Z2Z1 1910 aa21.29■■□□□ 1
VPS36-204ENST00000480923 WDFY4Q6ZS81 3184 aa21.28■■□□□ 1
VPS36-204ENST00000480923 FAM92AA1XBS5 289 aa21.28■■□□□ 1
VPS36-204ENST00000480923 HHLA1C9JL84 531 aa21.28■■□□□ 1
VPS36-204ENST00000480923 LEFTY2O00292 366 aa21.28■■□□□ 1
VPS36-204ENST00000480923 OLFM2O95897 454 aa21.28■■□□□ 1
VPS36-204ENST00000480923 CD19P15391 556 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms