RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
SIK3-210ENST00000480468 POTEHQ6S545 545 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 TICAM1Q8IUC6 712 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 NAT8LQ8N9F0 302 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 ADCY4Q8NFM4 1077 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 CCT7Q99832 543 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 OSBPL6Q9BZF3 934 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 MRPL47Q9HD33 250 aaKnown RBP11.09□□□□□ -0.63
SIK3-210ENST00000480468 ZNF652Q9Y2D9 606 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 PLLPQ9Y342 182 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 AP4B1Q9Y6B7 739 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 IKBKGQ9Y6K9 419 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 H3BSA7 217 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 BANF1O75531 89 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 CAPNS1P04632 268 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 MYL4P12829 197 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 ATP6V1B1P15313 513 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 ALOX15P16050 662 aaPredicted RBP11.09□□□□□ -0.63
SIK3-210ENST00000480468 CD58P19256 250 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 RELAQ04206 551 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 CBLBQ13191 982 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 UBAP2LQ14157 1087 aaKnown RBP11.09□□□□□ -0.63
SIK3-210ENST00000480468 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 MSS51Q4VC12 460 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 LRRC38Q5VT99 294 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 ENOSF1Q7L5Y1 443 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 FBXW8Q8N3Y1 598 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SHKBP1Q8TBC3 707 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
SIK3-210ENST00000480468 RILPQ96NA2 401 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 NT5C1BQ96P26 610 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 SLC2A11Q9BYW1 496 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 KLC2Q9H0B6 622 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 PCDHA1Q9Y5I3 950 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
SIK3-210ENST00000480468 MYPNQ86TC9 1320 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 A0A0B4J269 797 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 CCDC162PA2VCL2 907 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
SIK3-210ENST00000480468 INHBAP08476 426 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 L1CAMP32004 1257 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 ECE1P42892 770 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 BTDP43251 543 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 EPHB1P54762 984 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 PDAP1Q13442 181 aaKnown RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 TUBB3Q13509 450 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 RALGPS1Q5JS13 557 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 FNBP1LQ5T0N5 605 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 MON1BQ7L1V2 547 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 ARCQ7LC44 396 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 RIN3Q8TB24 985 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 CPT1BQ92523 772 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 VCPIP1Q96JH7 1222 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 AGAP3Q96P47 875 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 KCNK16Q96T55 309 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 PRPF18Q99633 342 aaKnown RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 TMOD2Q9NZR1 351 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 JAG2Q9Y219 1238 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 BCS1LQ9Y276 419 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 TDRKHQ9Y2W6 561 aaKnown RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 CYP3A4P08684 503 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 FUT4P22083 530 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 PRDX6P30041 224 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 HALP42357 657 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 PHKA2P46019 1235 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 NSFP46459 744 aaKnown RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 CHI3L2Q15782 390 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 BCL2A1Q16548 175 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 KRT39Q6A163 491 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 RWDD4Q6NW29 188 aaKnown RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 CLEC4GQ6UXB4 293 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 PDIK1LQ8N165 341 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 SEMA4DQ92854 862 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 CMTM5Q96DZ9 223 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 NACC1Q96RE7 527 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.64
SIK3-210ENST00000480468 FAM96AQ9H5X1 160 aa11.08□□□□□ -0.64
SIK3-210ENST00000480468 DHX33Q9H6R0 707 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms