RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 ZNF852Q6ZMS4 543 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ACOT1Q86TX2 421 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 TWNKQ96RR1 684 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 NELL2Q99435 816 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ACBD6Q9BR61 282 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ZCWPW1Q9H0M4 648 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 CHRDQ9H2X0 955 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 CYP4F11Q9HBI6 524 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ZNF334Q9HCZ1 680 aaPredicted RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 CRTAC1Q9NQ79 661 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 CISHQ9NSE2 258 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 AJAP1Q9UKB5 411 aaPredicted RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 NDRG2Q9UN36 371 aaKnown RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 SLC27A5Q9Y2P5 690 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 CFAP47Q6ZTR5 3102 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 MTMR11A4FU01 709 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 LRRC10BA6NIK2 292 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 PRRG1O14668 218 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 CILPO75339 1184 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 SOAT2O75908 522 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 CALCAP01258 141 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 PTPN1P18031 435 aaKnown RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 TBXAS1P24557 533 aaPredicted RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 ELF1P32519 619 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 USP8P40818 1118 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 TWF1Q12792 350 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 DUSP4Q13115 394 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 GPR17Q13304 367 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 TEAD2Q15562 447 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 TMC8Q8IU68 726 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 DCP1BQ8IZD4 617 aaKnown RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 TTC9BQ8N6N2 239 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 ATAD1Q8NBU5 361 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 SPATA18Q8TC71 538 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 SMARCD2Q92925 531 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 KREMEN1Q96MU8 473 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 LRRC3BQ96PB8 259 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 ELOVL4Q9GZR5 314 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 BRD9Q9H8M2 597 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 TRPV4Q9HBA0 871 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 ZFP14Q9HCL3 533 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 RTN4Q9NQC3 1192 aaKnown RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 FAM207AQ9NSI2 230 aaPredicted RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 FAM49BQ9NUQ9 324 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 C2orf42Q9NWW7 574 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 IFNKQ9P0W0 207 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 NCDNQ9UBB6 729 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
VCP-206ENST00000480327 DNAJC12Q9UKB3 198 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 PCDHB4Q9Y5E5 795 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
VCP-206ENST00000480327 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 CLDN5O00501 218 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PNMA6AP0CW24 399 aaPredicted RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 CHRNB1P11230 501 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 KRT5P13647 590 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 CCDC130P13994 396 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PSMC3P17980 439 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 ADORA2BP29275 332 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 GDI1P31150 447 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 MFAP3P55082 362 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 UBASH3AP57075 661 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 YWHAEP62258 255 aaKnown RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 SATB1Q01826 763 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 INCA1Q0VD86 236 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 RAPGEF1Q13905 1077 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 LPAL2Q16609 132 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 KLHDC7AQ5VTJ3 777 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 IQCEQ6IPM2 695 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 TMEM270Q6UE05 265 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PDZD4Q76G19 769 aaPredicted RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 UNC93AQ86WB7 457 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 SPATA2LQ8IUW3 424 aaPredicted RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 B3GALNT2Q8NCR0 500 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 ZSCAN18Q8TBC5 510 aaPredicted RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 ATRIPQ8WXE1 791 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 MYLPFQ96A32 169 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 HEXIM2Q96MH2 286 aaKnown RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 CNTNAP3BQ96NU0 1288 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 PKMYT1Q99640 499 aa9.61□□□□□ -0.87
VCP-206ENST00000480327 SEPT5Q99719 369 aaPredicted RBP9.61□□□□□ -0.87
VCP-206ENST00000480327 MED10Q9BTT4 135 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms