RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 CREG2Q8IUH2 290 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 FUKQ8N0W3 1084 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 UBE2Q2Q8WVN8 375 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 UBXN4Q92575 508 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 TRIM43Q96BQ3 446 aaPredicted RBP10.99□□□□□ -0.65
LINC00173-203ENST00000480237 MCRS1Q96EZ8 462 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 RPGRIP1Q96KN7 1286 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 TMEM175Q9BSA9 504 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 COLEC11Q9BWP8 271 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 PRDM10Q9NQV6 1147 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 RNF14Q9UBS8 474 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 FAN1Q9Y2M0 1017 aa10.99□□□□□ -0.65
LINC00173-203ENST00000480237 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 COL4A4P53420 1690 aaPredicted RBP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 TMEM191CA6NGB0 347 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 PGRMC1O00264 195 aaKnown RBP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 NRP1O14786 923 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 XPO1O14980 1071 aaKnown RBP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 EFCAB14O75071 495 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 AP1G2O75843 785 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 LCP1P13796 627 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 PSMA2P25787 234 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 CTNNA2P26232 953 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 CTNNA1P35221 906 aaKnown RBP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 GJC1P36383 396 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 ACADSBP45954 432 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 PLA2G4AP47712 749 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SLC11A1P49279 550 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 C2orf54Q08AI8 447 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MFSD5Q6N075 450 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 CRIPAKQ8N1N5 446 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 JOSD2Q8TAC2 188 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MYCBPAPQ8TBZ2 947 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 STK32AQ8WU08 396 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SLC35F5Q8WV83 523 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 KRT35Q92764 455 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MYLPFQ96A32 169 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 DUSP16Q9BY84 665 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 B3GNT5Q9BYG0 378 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 CARD9Q9H257 536 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 CYLDQ9NQC7 956 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
LINC00173-203ENST00000480237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00173-203ENST00000480237 MYBPHLA2RUH7 354 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 PDE2AO00408 941 aaPredicted RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 PSTPIP1O43586 416 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 TLL1O43897 1013 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ALDH2P05091 517 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 DESP17661 470 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ITGB8P26012 769 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 CDR1P51861 262 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ADIGQ0VDE8 80 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ELAVL2Q12926 359 aaKnown RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 MAPRE1Q15691 268 aaKnown RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ELF2Q15723 593 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 SPOUT1Q5T280 376 aaKnown RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 DCAF12L1Q5VU92 463 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 DAB2IPQ5VWQ8 1189 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ZDHHC17Q8IUH5 632 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 OR10T2Q8NGX3 314 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 ALG3Q92685 438 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 CD101Q93033 1021 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 PCED1BQ96HM7 432 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 RNPC3Q96LT9 517 aaKnown RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
LINC00173-203ENST00000480237 NYNRINQ9P2P1 1898 aaKnown RBP10.97□□□□□ -0.65
LINC00173-203ENST00000480237 MYO7AQ13402 2215 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 DYNC1I1O14576 645 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 SYN3O14994 580 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 GRAP2O75791 330 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 ACRP10323 421 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 GPD1P21695 349 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 RFC1P35251 1148 aaPredicted RBP10.96□□□□□ -0.65
LINC00173-203ENST00000480237 PBX3P40426 434 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 RWDD2BP57060 319 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 MAP3K7CLP57077 242 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
LINC00173-203ENST00000480237 WDR5P61964 334 aaKnown RBP10.96□□□□□ -0.65
LINC00173-203ENST00000480237 DEFB103AP81534 67 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 OGDHQ02218 1023 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 ZNF252P-AS1Q0IIN9 211 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 ZNF211Q13398 564 aaPredicted RBP10.96□□□□□ -0.65
LINC00173-203ENST00000480237 ERCC6LQ2NKX8 1250 aa10.96□□□□□ -0.65
LINC00173-203ENST00000480237 ZFYVE27Q5T4F4 411 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms