RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 SGSM2O43147 1006 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 PRPF3O43395 683 aaKnown RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 LDOC1O95751 146 aaPredicted RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 CSH1P0DML2 217 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 CSH2P0DML3 217 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 ADH5P11766 374 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 NAMPTP43490 491 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 NLRP5P59047 1200 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 ATP2C1P98194 919 aaPredicted RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 KCNB1Q14721 858 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 EGFLAMQ63HQ2 1017 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 ADGRG2Q8IZP9 1017 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
USP11-208ENST00000480104 CLCA2Q9UQC9 943 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
USP11-208ENST00000480104 CELSR1Q9NYQ6 3014 aa12.83□□□□□ -0.35
USP11-208ENST00000480104 METTL12A8MUP2 240 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 LEFTY2O00292 366 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 SLC27A2O14975 620 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 ADH1CP00326 375 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 ODC1P11926 461 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 CHMLP26374 656 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 LRPAP1P30533 357 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 SPAG1Q07617 926 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 RHBDF2Q6PJF5 856 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 GATAD2AQ86YP4 633 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 CHPFQ8IZ52 775 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 DCBLD1Q8N8Z6 715 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 SNX19Q92543 992 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 HSD17B14Q9BPX1 270 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 DPH1Q9BZG8 443 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 PCDHB1Q9Y5F3 818 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 CACNA1DQ01668 2161 aa12.83□□□□□ -0.36
USP11-208ENST00000480104 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 MTORP42345 2549 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 PPEF2O14830 753 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 MPOP05164 745 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 HARSP12081 509 aaKnown RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 ITGB6P18564 788 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 HDCP19113 662 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 EFNA5P52803 228 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 SLC10A6Q3KNW5 377 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 LINC00303Q3SY05 128 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 KCNT1Q5JUK3 1230 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 KDM7AQ6ZMT4 941 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 FAM26EQ8N5C1 309 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 C2orf15Q8WU43 125 aaKnown RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 USP36Q9P275 1121 aaKnown RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 UXTQ9UBK9 157 aaPredicted RBP12.82□□□□□ -0.36
USP11-208ENST00000480104 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 F8P00451 2351 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 TMEM131Q92545 1883 aa12.82□□□□□ -0.36
USP11-208ENST00000480104 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 M0R2N6 131 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 LAD1O00515 517 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 PAPSS1O43252 624 aaPredicted RBP12.81□□□□□ -0.36
USP11-208ENST00000480104 NOL4O94818 638 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 NFICP08651 508 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 MCF2P10911 925 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 GSPT1P15170 499 aaKnown RBP12.81□□□□□ -0.36
USP11-208ENST00000480104 RCAN1P53805 252 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 TEAD4Q15561 434 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 CACTIN-AS1Q8N1I8 211 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 TERB1Q8NA31 727 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 RFFLQ8WZ73 363 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 TRMT2BQ96GJ1 504 aaKnown RBP12.81□□□□□ -0.36
USP11-208ENST00000480104 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 GABRG3Q99928 467 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
USP11-208ENST00000480104 CITO14578 2027 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 ABLIM1O14639 778 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 TRIM24O15164 1050 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 TULP3O75386 442 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
USP11-208ENST00000480104 CTSKP43235 329 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 GRIA4P48058 902 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 ERVPABLB-1P60509 514 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 GABREP78334 506 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 INSM1Q01101 510 aaPredicted RBP12.8□□□□□ -0.36
USP11-208ENST00000480104 PPP2R5AQ15172 486 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 DDR2Q16832 855 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 LY6G5CQ5SRR4 150 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 SDE2Q6IQ49 451 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms