RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 GDPD2Q9HCC8 539 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 TMEM30AQ9NV96 361 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 A0A1W2PQ27 194 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 A0A1W2PQ64 194 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 A0A1W2PQD8 194 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 ZNF840PA6NDX5 716 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 LEFTY2O00292 366 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 ATG13O75143 517 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 RNF40O75150 1001 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 VNN1O95497 513 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 NFATC1O95644 943 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 ABL1P00519 1130 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 HOXA6P31267 233 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 TAF10Q12962 218 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 NR1H3Q13133 447 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 SGSM1Q2NKQ1 1148 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 ZACNQ401N2 412 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 FBXO43Q4G163 708 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 NAIF1Q69YI7 327 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-218ENST00000479554 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 FAM35AQ86V20 835 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 WDR5BQ86VZ2 330 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 NUP93Q8N1F7 819 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 CD101Q93033 1021 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 SDCBP2Q9H190 292 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 USP18Q9UMW8 372 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 TRAF3IP3Q9Y228 551 aa15.23■□□□□ 0.03
ATG4B-218ENST00000479554 RTN3O95197 1032 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 YWHAQP27348 245 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 GALK1P51570 392 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 UBE2HP62256 183 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SLC7A9P82251 487 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 DPYDQ12882 1025 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SRSF5Q13243 272 aaKnown RBP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 GSE1Q14687 1217 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 KRBA2Q6ZNG9 492 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 PDZD8Q8NEN9 1154 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 TAF4BQ92750 862 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 FBXO32Q969P5 355 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 FBRSL1Q9HCM7 1045 aaKnown RBP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 DMAP1Q9NPF5 467 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SMPD4Q9NXE4 827 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 SLC8A2Q9UPR5 921 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 CPQQ9Y646 472 aa15.22■□□□□ 0.03
ATG4B-218ENST00000479554 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 IKBKBO14920 756 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 MAPK13O15264 365 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 HRO43593 1189 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 OLFM2O95897 454 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 OAS1P00973 400 aaKnown RBP15.21■□□□□ 0.03
ATG4B-218ENST00000479554 HLA-DRAP01903 254 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 NR2F2P24468 414 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 HOXC13P31276 330 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 VAMP7P51809 220 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 ZXDBP98169 803 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 LMNB2Q03252 620 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 NFIL3Q16649 462 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 RSPO4Q2I0M5 234 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-218ENST00000479554 CEP68Q76N32 757 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 DGLUCYQ7Z3D6 616 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 ACOT1Q86TX2 421 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 OVCA2Q8WZ82 227 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 IMPG2Q9BZV3 1241 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 RNF38Q9H0F5 515 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 LINC00597Q9H2U6 94 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 KRT82Q9NSB4 513 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 MAPK8IP1Q9UQF2 711 aa15.21■□□□□ 0.03
ATG4B-218ENST00000479554 GADD45BO75293 160 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 AP1G2O75843 785 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 RETP07949 1114 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 KRT13P13646 458 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 PXNP49023 591 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 NDST1P52848 882 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 SLC5A3P53794 718 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 ORC1Q13415 861 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 PAQR9Q6ZVX9 377 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 INTS8Q75QN2 995 aaKnown RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 FAM186BQ8IYM0 893 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 GUF1Q8N442 669 aaKnown RBP15.2■□□□□ 0.02
ATG4B-218ENST00000479554 KIAA1958Q8N8K9 716 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 RPLP0P6Q8NHW5 317 aa15.2■□□□□ 0.02
ATG4B-218ENST00000479554 KCNK16Q96T55 309 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms