RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 CHORDC1Q9UHD1 332 aaPredicted RBP18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 ZMYM5Q9UJ78 669 aa18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 GMEB2Q9UKD1 530 aa18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 RAB23Q9ULC3 237 aa18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
ECHDC1-216ENST00000479525 MED19A0JLT2 244 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 TRDMT1O14717 391 aaKnown RBP18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 STAU1O95793 577 aaKnown RBP18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 HLA-DRAP01903 254 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 TGM1P22735 817 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 ATICP31939 592 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 DPYDQ12882 1025 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 PDGFRLQ15198 375 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 C1orf228Q6PIY5 440 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 KRBA2Q6ZNG9 492 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 SV2AQ7L0J3 742 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 FILIP1Q7Z7B0 1213 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 C12orf29Q8N999 325 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 GOLGA5Q8TBA6 731 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 FBXO32Q969P5 355 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 WBP2Q969T9 261 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 TWNKQ96RR1 684 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 ELOVL4Q9GZR5 314 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 ZDHHC4Q9NPG8 344 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 KRT82Q9NSB4 513 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 ARHGAP26Q9UNA1 814 aa18.48■□□□□ 0.55
ECHDC1-216ENST00000479525 PDXKO00764 312 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 MBL2P11226 248 aaPredicted RBP18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 NR2F2P24468 414 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 ADORA2BP29275 332 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 GCLMP48507 274 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 NDST1P52848 882 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 MESP2Q0VG99 397 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 MAMSTRQ6ZN01 415 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 CEP68Q76N32 757 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 LONP2Q86WA8 852 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 FUKQ8N0W3 1084 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 CD101Q93033 1021 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 CCSER2Q9H7U1 834 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 CFAP97Q9P2B7 532 aa18.47■□□□□ 0.55
ECHDC1-216ENST00000479525 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 AP1G2O75843 785 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 AKAP3O75969 853 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 IRF1P10914 325 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 SLC6A11P48066 632 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 VAMP7P51809 220 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 SLC5A3P53794 718 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 CLDN10P78369 228 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 PPP3CAQ08209 521 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 GAB4Q2WGN9 574 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 ZACNQ401N2 412 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 DGLUCYQ7Z3D6 616 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 NUP93Q8N1F7 819 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 ZMIZ2Q8NF64 920 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 SLC2A14Q8TDB8 520 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 ATP2A3Q93084 1043 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 SMOQ99835 787 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 GMIPQ9P107 970 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 INVSQ9Y283 1065 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 FRMD4BQ9Y2L6 1034 aa18.46■□□□□ 0.55
ECHDC1-216ENST00000479525 RHOBTB3O94955 611 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 ZNF202O95125 648 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 OAS1P00973 400 aaKnown RBP18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 CYP17A1P05093 508 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 CD58P19256 250 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 YWHAQP27348 245 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 OPRD1P41143 372 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 ASPAP45381 313 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 MAP3K7CLP57077 242 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 PNOCQ13519 176 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 GPRIN1Q7Z2K8 1008 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 C12orf40Q86WS4 652 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 FAM160A2Q8N612 972 aaPredicted RBP18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 TAS1R2Q8TE23 839 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 SECISBP2LQ93073 1101 aaKnown RBP18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 SMOC1Q9H4F8 434 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 VRTNQ9H8Y1 702 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 SLC8A2Q9UPR5 921 aa18.45■□□□□ 0.54
ECHDC1-216ENST00000479525 FAM237AA0A1B0GTK4 181 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 SOBPA7XYQ1 873 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 DCLK1O15075 740 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 AXIN1O15169 862 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 COCHO43405 550 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 PAPSS2O95340 614 aaPredicted RBP18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 KDSRQ06136 332 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 C2orf27AQ580R0 203 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 LAIR1Q6GTX8 287 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 THADAQ6YHU6 1953 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 KBTBD6Q86V97 674 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 WDR5BQ86VZ2 330 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 FAM186BQ8IYM0 893 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 SYNPOQ8N3V7 929 aa18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms