RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 CPSF1Q10570 1443 aaKnown RBP3.32□□□□□ -1.88
ATRX-205ENST00000479487 ATP7AQ04656 1500 aa3.32□□□□□ -1.88
ATRX-205ENST00000479487 NEXMIFQ5QGS0 1516 aa3.32□□□□□ -1.88
ATRX-205ENST00000479487 ZFYVE16Q7Z3T8 1539 aa3.32□□□□□ -1.88
ATRX-205ENST00000479487 NRKQ7Z2Y5 1582 aa3.32□□□□□ -1.88
ATRX-205ENST00000479487 MAP2P11137 1827 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 XRN1Q8IZH2 1706 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 ARAP3Q8WWN8 1544 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 TULP4Q9NRJ4 1543 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 AOX1Q06278 1338 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 SPATA31A3Q5VYP0 1347 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 NPHP3Q7Z494 1330 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 ATXN2Q99700 1313 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 CCDC78A2IDD5 438 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 PRSS29PA6NIE9 313 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 EFCAB8A8MWE9 144 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 AP5Z1O43299 807 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 FIBPO43427 364 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 STX6O43752 255 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 LPXNO60711 386 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 HMMRO75330 724 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 EIF3JO75822 258 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 AGFG2O95081 481 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 MATN4O95460 622 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 GPANK1O95872 356 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 S100BP04271 92 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 TYRP14679 529 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 LPOP22079 712 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 PIK3CGP48736 1102 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 LMAN1P49257 510 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 MAP2K6P52564 334 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 VAV2P52735 878 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 EIF5P55010 431 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 COL10A1Q03692 680 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 RESTQ13127 1097 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CCDC93Q567U6 631 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 FAM102BQ5T8I3 360 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CATIPQ7Z7H3 387 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 TADA2BQ86TJ2 420 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 ERC1Q8IUD2 1116 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 LRRC8AQ8IWT6 810 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 TCEAL8Q8IYN2 117 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 LNX2Q8N448 690 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 AOPEPQ8N6M6 819 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 SLC35G2Q8TBE7 412 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 TBC1D15Q8TC07 691 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 DIS3LQ8TF46 1054 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 JPH3Q8WXH2 748 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 DDX17Q92841 729 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 TSR2Q969E8 191 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 RAB24Q969Q5 203 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 NACC2Q96BF6 587 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 MARS2Q96GW9 593 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 CDK5RAP3Q96JB5 506 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 KLHL32Q96NJ5 620 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 MAP3K14Q99558 947 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 VRK1Q99986 396 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 OSBPL5Q9H0X9 879 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 MRPL46Q9H2W6 279 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 CLSTN2Q9H4D0 955 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 ZSCAN16Q9H4T2 348 aaPredicted RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 DCTPP1Q9H773 170 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 ARFGAP3Q9NP61 516 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 A1CFQ9NQ94 594 aaKnown RBP3.31□□□□□ -1.88
ATRX-205ENST00000479487 ZIM2Q9NZV7 527 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CTTNBP2NLQ9P2B4 639 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CFAP97Q9P2B7 532 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CHPF2Q9P2E5 772 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATRX-205ENST00000479487 ZNF180Q9UJW8 692 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 CNPY2Q9Y2B0 182 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 INSL6Q9Y581 213 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATRX-205ENST00000479487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATRX-205ENST00000479487 NOX1Q9Y5S8 564 aa3.31□□□□□ -1.88
ATRX-205ENST00000479487 MROH1Q8NDA8 1641 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 ABCC6O95255 1503 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATRX-205ENST00000479487 MSH6P52701 1360 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 TTC21AQ8NDW8 1320 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 A0A087WUV0 522 aaPredicted RBP3.3□□□□□ -1.88
ATRX-205ENST00000479487 A0A088AWK7 358 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 PRAMEF33A0A0G2JMD5 474 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 CCDC151A5D8V7 595 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 TMCO5BA8MYB1 307 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 EIF3CLB5ME19 914 aaKnown RBP3.3□□□□□ -1.88
ATRX-205ENST00000479487 GOLGA6L19H0YKK7 550 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 POLR3GO15318 223 aaPredicted RBP3.3□□□□□ -1.88
ATRX-205ENST00000479487 PROM1O43490 865 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 PRAMEF10O60809 474 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 SOAT2O75908 522 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 ZFPL1O95159 310 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 SMC2O95347 1197 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 FTLP02792 175 aaPredicted RBP3.3□□□□□ -1.88
ATRX-205ENST00000479487 ZNF853P0CG23 659 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 HKR1P10072 659 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 SRGNP10124 158 aa3.3□□□□□ -1.88
ATRX-205ENST00000479487 RARBP10826 455 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms