RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
GCA-208ENST00000479199 ABL1P00519 1130 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 OAS1P00973 400 aaKnown RBP12.8□□□□□ -0.36
GCA-208ENST00000479199 C1QTNF9P0C862 333 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 PFKLP17858 780 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 SPINK2P20155 84 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 HOXD13P35453 343 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 SLC6A11P48066 632 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 SLC7A9P82251 487 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 DHCR24Q15392 516 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 MAPRE1Q15691 268 aaKnown RBP12.8□□□□□ -0.36
GCA-208ENST00000479199 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 ARMCX6Q7L4S7 300 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
GCA-208ENST00000479199 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 MYCBPAPQ8TBZ2 947 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 USP28Q96RU2 1077 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 ZNF518BQ9C0D4 1074 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 DPEP3Q9H4B8 488 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 TMEM9BQ9NQ34 198 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 CFAP97Q9P2B7 532 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
GCA-208ENST00000479199 SGK1O00141 431 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 PROS1P07225 676 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 DLATP10515 647 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 MBL2P11226 248 aaPredicted RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 TIE1P35590 1138 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 IRX4P78413 519 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 TAF10Q12962 218 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 CUL4AQ13619 759 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 SURF1Q15526 300 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 PIGKQ92643 395 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 CEP295NLQ96MC4 621 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 SNX25Q9H3E2 840 aa12.79□□□□□ -0.36
GCA-208ENST00000479199 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 ATXN2Q99700 1313 aaKnown RBP12.79□□□□□ -0.36
GCA-208ENST00000479199 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 CLDN5O00501 218 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 KAT7O95251 611 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 APODP05090 189 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 ADH5P11766 374 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 PDCP20941 246 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 SYT1P21579 422 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 P2RY2P41231 377 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 MRPS21P82921 87 aaKnown RBP12.78□□□□□ -0.36
GCA-208ENST00000479199 SNRNP35Q16560 246 aaKnown RBP12.78□□□□□ -0.36
GCA-208ENST00000479199 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 HMGB4Q8WW32 186 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 C8orf48Q96LL4 319 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 PNKPQ96T60 521 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 ARHGEF4Q9NR80 690 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 EHD2Q9NZN4 543 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 BCCIPQ9P287 314 aaKnown RBP eCLIP12.78□□□□□ -0.36
GCA-208ENST00000479199 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
GCA-208ENST00000479199 WASF3Q9UPY6 502 aa12.78□□□□□ -0.36
GCA-208ENST00000479199 TCRBV21S2A2A0A5A6 115 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 SLC9A3R1O14745 358 aaPredicted RBP12.77□□□□□ -0.37
GCA-208ENST00000479199 ADAM23O75077 832 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 TACC1O75410 805 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 ALDH1A2O94788 518 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 ADH1CP00326 375 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
GCA-208ENST00000479199 PTPN1P18031 435 aaKnown RBP12.77□□□□□ -0.37
GCA-208ENST00000479199 TNNI1P19237 187 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.37
GCA-208ENST00000479199 PTGER3P43115 390 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 KIR2DL1P43626 348 aaPredicted RBP12.77□□□□□ -0.37
GCA-208ENST00000479199 MAPK8P45983 427 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 PPP3CCP48454 512 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 CYP2J2P51589 502 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 TNNC1P63316 161 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 ASIC1P78348 528 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 SLC39A14Q15043 492 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 E2F4Q16254 413 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
GCA-208ENST00000479199 TDRD10Q5VZ19 366 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms