RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 C2orf15Q8WU43 125 aaKnown RBP13.82□□□□□ -0.2
CHD3-210ENST00000479080 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 MCRS1Q96EZ8 462 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 LRCH3Q96II8 777 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 HSFY1Q96LI6 401 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
CHD3-210ENST00000479080 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 KCND1Q9NSA2 647 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 ANKRD62A6NC57 917 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
CHD3-210ENST00000479080 PER2O15055 1255 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 ADIGQ0VDE8 80 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 KCNC3Q14003 757 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 SPA17Q15506 151 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 TAF5Q15542 800 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 PLEKHA7Q6IQ23 1121 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 ERICH1Q86X53 443 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
CHD3-210ENST00000479080 JOSD2Q8TAC2 188 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 DNAI2Q9GZS0 605 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 PNPLA8Q9NP80 782 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 CYLDQ9NQC7 956 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 AVENQ9NQS1 362 aaPredicted RBP13.81□□□□□ -0.2
CHD3-210ENST00000479080 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 TRMT1Q9NXH9 659 aaKnown RBP13.81□□□□□ -0.2
CHD3-210ENST00000479080 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 INTUQ9ULD6 942 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 INSL5Q9Y5Q6 135 aa13.81□□□□□ -0.2
CHD3-210ENST00000479080 ADH1AP07327 375 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 CCDC175P0C221 793 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 LCP1P13796 627 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
CHD3-210ENST00000479080 KLRC2P26717 231 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 GRIK1P39086 918 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 TKTL1P51854 596 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 DAOAP59103 153 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 KRT83P78385 493 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 OGDHQ02218 1023 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 DUSP6Q16828 381 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 ZNF662Q6ZS27 426 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 KREMEN2Q8NCW0 462 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 MICAL1Q8TDZ2 1067 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 GIPC2Q8TF65 315 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 MRPL38Q96DV4 380 aaKnown RBP13.8□□□□□ -0.2
CHD3-210ENST00000479080 VCPIP1Q96JH7 1222 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 EMILIN2Q9BXX0 1053 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 MIS12Q9H081 205 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 CYP4F11Q9HBI6 524 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 HSFX1Q9UBD0 423 aa13.8□□□□□ -0.2
CHD3-210ENST00000479080 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
CHD3-210ENST00000479080 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 FAM92AA1XBS5 289 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 BTNL10A8MVZ5 291 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 TRIM66O15016 1216 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 NRDCO43847 1150 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 TADA3O75528 432 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 GLUD1P00367 558 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 CALB1P05937 261 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 FYNP06241 537 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 GPC5P78333 572 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 TWF1Q12792 350 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 MAMLD1Q13495 774 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 ZNF268Q14587 947 aaPredicted RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 OTUD1Q5VV17 481 aaPredicted RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 PM20D1Q6GTS8 502 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 PDE12Q6L8Q7 609 aaKnown RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 SCD5Q86SK9 330 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 RBM23Q86U06 439 aaKnown RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 SCUBE3Q8IX30 993 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 SCML4Q8N228 414 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 C3orf20Q8ND61 904 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 C18orf8Q96DM3 657 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
CHD3-210ENST00000479080 ZNF334Q9HCZ1 680 aaPredicted RBP13.79□□□□□ -0.2
CHD3-210ENST00000479080 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms