RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 FAM3CQ92520 227 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 JAKMIP2Q96AA8 810 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 ZFYVE19Q96K21 471 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 CYP2S1Q96SQ9 504 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 ARID3AQ99856 593 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 OSBPL6Q9BZF3 934 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 FBXO44Q9H4M3 255 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 C8orf33Q9H7E9 229 aaPredicted RBP17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 LTB4R2Q9NPC1 389 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 TMEM30AQ9NV96 361 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 COMMD8Q9NX08 183 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 CCL26Q9Y258 94 aa17.97■□□□□ 0.47
CDKN1A-207ENST00000478800 PMM2O15305 246 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 KCNH2Q12809 1159 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 TRIM59Q8IWR1 403 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 WHAMMQ8TF30 809 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 LRRC3BQ96PB8 259 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 SMOQ99835 787 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 DDX23Q9BUQ8 820 aaKnown RBP17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 NACA2Q9H009 215 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 CSNK1G1Q9HCP0 422 aa17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 NDRG2Q9UN36 371 aaKnown RBP17.96■□□□□ 0.47
CDKN1A-207ENST00000478800 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 MTF1Q14872 753 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 PDGFRLQ15198 375 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 ITPRIPL2Q3MIP1 535 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 PPM1KQ8N3J5 372 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 SCAMP5Q8TAC9 235 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 TTC8Q8TAM2 541 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 GTSE1Q9NYZ3 720 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 GCNT4Q9P109 453 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 ARHGAP26Q9UNA1 814 aa17.95■□□□□ 0.46
CDKN1A-207ENST00000478800 H0Y858 1186 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 ARNTLO00327 626 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 TNFRSF10BO14763 440 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 BEST1O76090 585 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 MAGEA9P43362 315 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 IFNAR2P48551 515 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 RAD23BP54727 409 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 AMPD2Q01433 879 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 NHLH1Q02575 133 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 TCF15Q12870 199 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 CLEC20AQ6ZU45 233 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 ALYREFQ86V81 257 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 RALGPS2Q86X27 583 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 FAM114A1Q8IWE2 563 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 ZMIZ2Q8NF64 920 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 SH3RF2Q8TEC5 729 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 ATOH1Q92858 354 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 CNOT6LQ96LI5 555 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 SLC22A12Q96S37 553 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 DUSP16Q9BY84 665 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 PNPLA8Q9NP80 782 aa17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 DUS2Q9NX74 493 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 MTF2Q9Y483 593 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-207ENST00000478800 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 CD19P15391 556 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 ACO1P21399 889 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 TARSP26639 723 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 ERCC5P28715 1186 aaPredicted RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 MTIF2P46199 727 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 TNK2Q07912 1038 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 HECTD3Q5T447 861 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 SLC4A11Q8NBS3 891 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 EHBP1Q8NDI1 1231 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 TLR8Q9NR97 1041 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 SPATA6Q9NWH7 488 aaPredicted RBP17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 GMIPQ9P107 970 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 HESX1Q9UBX0 185 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 PCDHB4Q9Y5E5 795 aa17.93■□□□□ 0.46
CDKN1A-207ENST00000478800 SPECC1L-ADORA2AF8WAN1 911 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 OAS1P00973 400 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 SOX9P48436 509 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 SLC7A9P82251 487 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 USP4Q13107 963 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 RUNX3Q13761 415 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 ZNF77Q15935 545 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 SGO2Q562F6 1265 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 ARHGAP17Q68EM7 881 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 TRIM68Q6AZZ1 485 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 DDX42Q86XP3 938 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 CPA6Q8N4T0 437 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 ATP2A3Q93084 1043 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 EXOC4Q96A65 974 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 FAM83CQ9BQN1 747 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 EBF3Q9H4W6 596 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 SMPD4Q9NXE4 827 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 IL37Q9NZH6 218 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 KIAA1257Q9ULG3 409 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 CPQQ9Y646 472 aa17.92■□□□□ 0.46
CDKN1A-207ENST00000478800 LEFTY2O00292 366 aa17.91■□□□□ 0.46
CDKN1A-207ENST00000478800 MBD3O95983 291 aa17.91■□□□□ 0.46
CDKN1A-207ENST00000478800 TCF3P15923 654 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms