RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 BCAT1P54687 386 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SLC8A3P57103 927 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TPM4P67936 248 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 KCNMA1Q12791 1236 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TAF10Q12962 218 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 GRM2Q14416 872 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 IQCB1Q15051 598 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TANGO2Q6ICL3 276 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 ENOSF1Q7L5Y1 443 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TTC30AQ86WT1 665 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 UBA3Q8TBC4 463 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TFAP2BQ92481 460 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 MYRFLQ96LU7 910 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 ASB16Q96NS5 453 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SLITRK1Q96PX8 696 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 RPP25Q9BUL9 199 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 DUSP16Q9BY84 665 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 CSNK1G1Q9HCP0 422 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 ACP6Q9NPH0 428 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 EHD2Q9NZN4 543 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 IGSF9Q9P2J2 1179 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 C2orf78A6NCI8 922 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 FAM86C2PA6NEL3 165 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ANHXE9PGG2 379 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 GOLGA6L19H0YKK7 550 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TULP2O00295 520 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 O00370 1275 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 DPYSL4O14531 572 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CYP26A1O43174 497 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 THAP12O43422 761 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 PRAMEF12O95522 483 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SERPINC1P01008 464 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CKMP06732 381 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ALADP13716 330 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 UCHL3P15374 230 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 FCARP24071 287 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF132P52740 706 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 BST2Q10589 180 aaKnown RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TDGQ13569 410 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SYCP1Q15431 976 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 KLHDC7AQ5VTJ3 777 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ARHGAP17Q68EM7 881 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ARID3BQ8IVW6 561 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ANKRD52Q8NB46 1076 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SHC3Q92529 594 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CEP295NLQ96MC4 621 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ZSWIM1Q9BR11 485 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TSPY26PQ9H489 355 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TASP1Q9H6P5 420 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ZFP14Q9HCL3 533 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 GMIPQ9P107 970 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 NCANO14594 1321 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 COL4A3Q01955 1670 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 F5P12259 2224 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 TRAV19A0A0A6YYK7 116 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 FAM170AA1A519 330 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 HHLA1C9JL84 531 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 PIK3R2O00459 728 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 EPHB6O15197 1021 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CFHP08603 1231 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 RGS7P49802 495 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 POLR2FP61218 127 aaKnown RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ZXDAP98168 799 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 DRAP1Q14919 205 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 LRSAM1Q6UWE0 723 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 APTXQ7Z2E3 356 aaKnown RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CMTM8Q8IZV2 173 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SLC44A3Q8N4M1 653 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ARL14EPQ8N8R7 260 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 NEK11Q8NG66 645 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SECISBP2LQ93073 1101 aaKnown RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SLC22A12Q96S37 553 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CYP2S1Q96SQ9 504 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 SLC46A2Q9BY10 475 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 PLA2G2FQ9BZM2 168 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 GPR88Q9GZN0 384 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 GANQ9H2C0 597 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 FBXO44Q9H4M3 255 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 EPHX3Q9H6B9 360 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 NLRC4Q9NPP4 1024 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CHORDC1Q9UHD1 332 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-215ENST00000478531 FBXL21Q9UKT6 434 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 KIAA1257Q9ULG3 409 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 DUSP12Q9UNI6 340 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 CCL26Q9Y258 94 aa7.28□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF840PA6NDX5 716 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 HEPACAM2A8MVW5 462 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 FOXN3O00409 490 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-215ENST00000478531 XPO1O14980 1071 aaKnown RBP7.27□□□□□ -1.25
BRCA1-215ENST00000478531 TEX33O43247 280 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 MED7O43513 233 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 ECI2O75521 394 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms