RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 STK3Q13188 491 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 ARL13BQ3SXY8 428 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 IZUMO3Q5VZ72 239 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 HIBCHQ6NVY1 386 aaPredicted RBP4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CATSPERGQ6ZRH7 1159 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 ZNF551Q7Z340 670 aaPredicted RBP4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 VGLL2Q8N8G2 317 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CCDC150Q8NCX0 1101 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CAGE1Q8TC20 777 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 R3HDM4Q96D70 268 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 LRRC46Q96FV0 321 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 C17orf80Q9BSJ5 609 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 MAGEB5Q9BZ81 275 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 IKZF4Q9H2S9 585 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CERS4Q9HA82 394 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 ARHGEF3Q9NR81 526 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CAPN11Q9UMQ6 739 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 USP22Q9UPT9 525 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CEP83Q9Y592 693 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 ARID4BQ4LE39 1312 aaPredicted RBP4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 LINC00473A8K010 186 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 FGF18O76093 207 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 ERBB2P04626 1255 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 MYL4P12829 197 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 NDUFB7P17568 137 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 UQCRC1P31930 480 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 MTHFSP49914 203 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 HMGA2P52926 109 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 PDE1AP54750 535 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 BTKQ06187 659 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 PMS2P11Q13670 270 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 LY6KQ17RY6 165 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 SLC9A4Q6AI14 798 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 MZT2AQ6P582 158 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 OLFML1Q6UWY5 402 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 KRT28Q7Z3Y7 464 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 GRASPQ7Z6J2 395 aaPredicted RBP4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 TXLNBQ8N3L3 684 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 LRRC71Q8N4P6 559 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 FANCBQ8NB91 859 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 GPR150Q8NGU9 434 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 DEPTORQ8TB45 409 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 XAGE5Q8WWM1 108 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 SOCS4Q8WXH5 440 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 ZNF668Q96K58 619 aaPredicted RBP4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 SGCZQ96LD1 299 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 DUSP26Q9BV47 211 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 EIF2AQ9BY44 585 aaKnown RBP4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 GJB4Q9NTQ9 266 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 SERTAD4Q9NUC0 356 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 SLC52A1Q9NWF4 448 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 FNIP2Q9P278 1114 aa4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 CCNL1Q9UK58 526 aaPredicted RBP4.7□□□□□ -1.66
SMARCA1-204ENST00000478420 GCOM1H8Y6P7 765 aaPredicted RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 PSMD9O00233 223 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 EBLN1P0CF75 366 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 HARSP12081 509 aaKnown RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 HGFP14210 728 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 IDEP14735 1019 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 PGDP52209 483 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 KCNAB1Q14722 419 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 FAM153CQ494X1 144 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 PRR16Q569H4 304 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 MORC1Q86VD1 984 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 CAND1Q86VP6 1230 aaKnown RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 SAMD3Q8N6K7 520 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 ZNF566Q969W8 418 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 HAPLN3Q96S86 360 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 AGAP2Q99490 1192 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 MPHOSPH6Q99547 160 aaKnown RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 DPCDQ9BVM2 203 aaPredicted RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 INO80BQ9C086 356 aaPredicted RBP4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 ZCWPW1Q9H0M4 648 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 SLC17A6Q9P2U8 582 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 DNAJB11Q9UBS4 358 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 TLK1Q9UKI8 766 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 ST3GAL5Q9UNP4 418 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 HPSEQ9Y251 543 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
SMARCA1-204ENST00000478420 FER1L4A9Z1Z3 1794 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 ZAR1LA6NP61 321 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 SNX2O60749 519 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 VNN1O95497 513 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 LMNAP02545 664 aaKnown RBP4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 PRKCBP05771 671 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 CYP2C18P33260 490 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 HTR3AP46098 478 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 GATMP50440 423 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 COPAP53621 1224 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 CACNA2D1P54289 1103 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 TPTEP56180 551 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 DGKKQ5KSL6 1271 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 MANEALQ5VSG8 457 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 ANKRD16Q6P6B7 361 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 USP17L6PQ6QN14 398 aa4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 PARS2Q7L3T8 475 aaKnown RBP4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 WDR53Q7Z5U6 358 aaPredicted RBP4.68□□□□□ -1.66
SMARCA1-204ENST00000478420 RAB11FIP4Q86YS3 637 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms