RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MYRFLQ96LU7 910 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 ASB16Q96NS5 453 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 SMG9Q9H0W8 520 aaKnown RBP10.87□□□□□ -0.67
HDAC6-222ENST00000478095 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-222ENST00000478095 CSNK1G1Q9HCP0 422 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 ACP6Q9NPH0 428 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-222ENST00000478095 DNAJC12Q9UKB3 198 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 TSPAN16Q9UKR8 245 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 FHOD1Q9Y613 1164 aa10.87□□□□□ -0.67
HDAC6-222ENST00000478095 ZFP37Q9Y6Q3 630 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-222ENST00000478095 C2orf16Q68DN1 1984 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 LGALS16A8MUM7 142 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TULP2O00295 520 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 O00370 1275 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TNFRSF10BO14763 440 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 DCXO43602 365 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 NARSO43776 548 aaKnown RBP10.86□□□□□ -0.67
HDAC6-222ENST00000478095 PRAMEF12O95522 483 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 ABL1P00519 1130 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 PAEPP09466 180 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 VDRP11473 427 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 FCARP24071 287 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 YWHAQP27348 245 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 VIPR2P41587 438 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 ZNF132P52740 706 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TAF10Q12962 218 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 KLHDC7AQ5VTJ3 777 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 ARHGAP17Q68EM7 881 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TANGO2Q6ICL3 276 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 MTSS1LQ765P7 747 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TTC30AQ86WT1 665 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 MAB21L3Q8N8X9 362 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 UBA3Q8TBC4 463 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 MRPS31Q92665 395 aaKnown RBP10.86□□□□□ -0.67
HDAC6-222ENST00000478095 SMARCD2Q92925 531 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 FBXO32Q969P5 355 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 PCMTD1Q96MG8 357 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-222ENST00000478095 ZSWIM1Q9BR11 485 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 SLC46A2Q9BY10 475 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 DUSP16Q9BY84 665 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 EPHX3Q9H6B9 360 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 TASP1Q9H6P5 420 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 FAM207AQ9NSI2 230 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-222ENST00000478095 IGSF9Q9P2J2 1179 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 SORCS3Q9UPU3 1222 aa10.86□□□□□ -0.67
HDAC6-222ENST00000478095 NCANO14594 1321 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 C2orf78A6NCI8 922 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 HHLA1C9JL84 531 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 M0QYV0 167 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 EPHB6O15197 1021 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 RTN3O95197 1032 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-222ENST00000478095 UCHL3P15374 230 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 UBXN1Q04323 297 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 PDE4CQ08493 712 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 TDGQ13569 410 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 GRM2Q14416 872 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 SYCP1Q15431 976 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 ARID3BQ8IVW6 561 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-222ENST00000478095 SLC44A3Q8N4M1 653 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 ANKRD52Q8NB46 1076 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 TTC16Q8NEE8 873 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 SHC3Q92529 594 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 KRTAP3-3Q9BYR6 98 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 GMIPQ9P107 970 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 HESX1Q9UBX0 185 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 DENND4AQ7Z401 1863 aa10.85□□□□□ -0.67
HDAC6-222ENST00000478095 ZNF840PA6NDX5 716 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 FAM86C2PA6NEL3 165 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 PI4K2BG5E9Z4 385 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-222ENST00000478095 CYP26A1O43174 497 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 TEX33O43247 280 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 THAP12O43422 761 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 CFHP08603 1231 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 ALADP13716 330 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 GNA15P30679 374 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 AVPR1AP37288 418 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 PGFP49763 221 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 RGS7P49802 495 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 BCAT1P54687 386 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 SLC8A3P57103 927 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 TPM4P67936 248 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 ZXDAP98168 799 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
HDAC6-222ENST00000478095 DRAP1Q14919 205 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-222ENST00000478095 LCLAT1Q6UWP7 414 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 VITQ6UXI7 678 aa10.84□□□□□ -0.67
HDAC6-222ENST00000478095 PIGZQ86VD9 579 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms