RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 SMIM28A0A1B0GU29 152 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 NT5C1B-RDH14C9J2C7 533 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 MIPP30301 263 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 GRM5P41594 1212 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 MAGEA4P43358 317 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 CENPCQ03188 943 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 MCL1Q07820 350 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 BIRC2Q13490 618 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 STKLD1Q8NE28 680 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 GANCQ8TET4 914 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 ATP6V1E2Q96A05 226 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 PAK5Q9P286 719 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 SEPT4O43236 478 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 HOXC6P09630 235 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 RARAP10276 462 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 FNTAP49354 379 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
SGSM3-209ENST00000478085 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
SGSM3-209ENST00000478085 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 GPC4O75487 556 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 C22orf31O95567 290 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
SGSM3-209ENST00000478085 MARCKSL1P49006 195 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
SGSM3-209ENST00000478085 GUCY1A3Q02108 690 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 SLC39A12Q504Y0 691 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 TADA2BQ86TJ2 420 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 DPF3Q92784 378 aa12.35□□□□□ -0.43
SGSM3-209ENST00000478085 SAE1Q9UBE0 346 aaPredicted RBP12.35□□□□□ -0.43
SGSM3-209ENST00000478085 CFAP69A5D8W1 941 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 RGS20O76081 388 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 F9P00740 461 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 STIP1P31948 543 aaKnown RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 NNMTP40261 264 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PPP2R2AP63151 447 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 RNF135Q8IUD6 432 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 C1orf127Q8N9H9 656 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 IPMKQ8NFU5 416 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 KLF6Q99612 283 aaPredicted RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 ULBP1Q9BZM6 244 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PDZD7Q9H5P4 517 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 ABCF3Q9NUQ8 709 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PCDHA3Q9Y5H8 950 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CHD4Q14839 1912 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 SLC12A8A0AV02 714 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 B4GALT4O60513 344 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PMPCBO75439 489 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CKMP06732 381 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PAMP19021 973 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TYK2P29597 1187 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 BRCC3P46736 316 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MAMLD1Q13495 774 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 BEND6Q5SZJ8 279 aaPredicted RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CYTH2Q99418 400 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TTC1Q99614 292 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CEP41Q9BYV8 373 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 C10orf88Q9H8K7 445 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 SARS2Q9NP81 518 aaKnown RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 AVENQ9NQS1 362 aaPredicted RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CLDN5O00501 218 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 NEMP1O14524 444 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TSPAN1O60635 241 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 URODP06132 367 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MAP2K2P36507 400 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 SPARCL1Q14515 664 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 PIGZQ86VD9 579 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 TMEM192Q8IY95 271 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MAF1Q9H063 256 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 MUC3BQ9H195 1237 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 AAASQ9NRG9 546 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
SGSM3-209ENST00000478085 CAPN7Q9Y6W3 813 aa12.34□□□□□ -0.43
SGSM3-209ENST00000478085 SH3BP5O60239 455 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 SLC6A3Q01959 620 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 RCN2Q14257 317 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 LDLRAD1Q5T700 205 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.44
SGSM3-209ENST00000478085 ASIC4Q96FT7 647 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 TMEM51Q9NW97 253 aa12.33□□□□□ -0.44
SGSM3-209ENST00000478085 NOMO3P69849 1222 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms