RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PCDHA10Q9Y5I2 948 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 POLR2AP24928 1970 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 VCANP13611 3396 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 RANBP2P49792 3224 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 DENND3A2RUS2 1198 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GOLGA8IPA6NC78 632 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GOLGA8JA6NMD2 632 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM110-MUSTN1A8MSY1 372 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MYO1FO00160 1098 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 VWA5AO00534 786 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SPOPO43791 374 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ATP9AO75110 1047 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 KIAA0754O94854 1291 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CCNE2O96020 404 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MMEP08473 750 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PAEPP09466 180 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NUDT17P0C025 328 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MYBL1P10243 752 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CYP11B1P15538 503 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 COMTP21964 271 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CFPP27918 469 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CNGA1P29973 690 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MAN1A1P33908 653 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NPTX2P47972 431 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 FNTAP49354 379 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PEX5P50542 639 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 RWDD2BP57060 319 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 BPIFB4P59827 614 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GCNT1Q02742 428 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CYP24A1Q07973 514 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 IFFO1Q0D2I5 559 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MESDQ14696 234 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SLMAPQ14BN4 828 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 POU4F3Q15319 338 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MLANAQ16655 118 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CLEC16AQ2KHT3 1053 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 KRT71Q3SY84 523 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GNPTABQ3T906 1256 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TTC31Q49AM3 519 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 BRDTQ58F21 947 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NAA35Q5VZE5 725 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 DENND2CQ68D51 928 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PLA2G4FQ68DD2 849 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TTC19Q6DKK2 380 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ACAD10Q6JQN1 1059 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NSMFQ6X4W1 530 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TRIM72Q6ZMU5 477 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SYDE1Q6ZW31 735 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ANO5Q75V66 913 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CYFIP1Q7L576 1253 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ARMC9Q7Z3E5 817 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TADA2BQ86TJ2 420 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NLRP14Q86W24 1093 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SLC13A5Q86YT5 568 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CBWD2Q8IUF1 395 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PRELID2Q8N945 189 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF473Q8WTR7 871 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 POMGNT1Q8WZA1 660 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ALG3Q92685 438 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SEMA4DQ92854 862 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 KAT5Q92993 513 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MAGOHBQ96A72 148 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ATG4CQ96DT6 458 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CEP170P1Q96L14 293 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 IFT74Q96LB3 600 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 C12orf42Q96LP6 360 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PCDHB18PQ96TA0 734 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM109Q9BVC6 243 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 NUP85Q9BW27 656 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 STMN4Q9H169 189 aaPredicted RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ATP6V0A4Q9HBG4 840 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ERVK-5Q9HDB9 667 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ADARB2Q9NS39 739 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 HOMER2Q9NSB8 354 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 RAB20Q9NX57 234 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 TMOD4Q9NZQ9 345 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 SLC12A6Q9UHW9 1150 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CNOT7Q9UIV1 285 aaKnown RBP5.25□□□□□ -1.57
SF3B6-202ENST00000478050 INPP5FQ9Y2H2 1132 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 PCDHA3Q9Y5H8 950 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 FAM169AQ9Y6X4 670 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 CACNA1BQ00975 2339 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 ZSWIM8A7E2V4 1837 aa5.25□□□□□ -1.57
SF3B6-202ENST00000478050 MYPNQ86TC9 1320 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 MGAMO43451 1857 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM150BA6NC51 233 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 GMNCA6NCL1 334 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 C19orf81C9J6K1 198 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 HNRNPDLO14979 420 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ATP2A1O14983 1001 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 DYNC1LI2O43237 492 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 EXTL3O43909 919 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF862O60290 1169 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 TNFRSF21O75509 655 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 STBD1O95210 358 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 FAM107AO95990 144 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 LDHAP00338 332 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms