RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 TMC5Q6UXY8 1006 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 ANKRD52Q8NB46 1076 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
CBWD3-206ENST00000478048 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 DNAI2Q9GZS0 605 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 HSFX1Q9UBD0 423 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 MAFFQ9ULX9 164 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 MYO6Q9UM54 1294 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 LUC7L2Q9Y383 392 aaKnown RBP12.12□□□□□ -0.47
CBWD3-206ENST00000478048 GREB1Q4ZG55 1949 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 FAM170AA1A519 330 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 M0QYV0 167 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 NCK2O43639 380 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 NPR3P17342 541 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 PDE6CP51160 858 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 BPIFB4P59827 614 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 PDE4CQ08493 712 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 CLUL1Q15846 466 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 RARS2Q5T160 578 aaKnown RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 SFMBT2Q5VUG0 894 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 MAFAQ8NHW3 353 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 IQCDQ96DY2 449 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 CSNK1G1Q9HCP0 422 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 PRDM6Q9NQX0 595 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 DZANK1Q9NVP4 752 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 DPP7Q9UHL4 492 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 NOCTQ9UK39 431 aaKnown RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ATP8B3O60423 1300 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 C5orf42Q9H799 3197 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 MFAP3LO75121 409 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 LRG1P02750 347 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 MMEP08473 750 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 SKILP12757 684 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 FERP16591 822 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 CHRNB2P17787 502 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 FECHP22830 423 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 HOXA9P31269 272 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 TRIM14Q14142 442 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ASIC2Q16515 512 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 OLIG1Q8TAK6 271 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 S1PR5Q9H228 398 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-206ENST00000478048 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 ZDHHC7Q9NXF8 308 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 HESX1Q9UBX0 185 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
CBWD3-206ENST00000478048 TRIM66O15016 1216 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 GPR37O15354 613 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 MED7O43513 233 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 GDF9O60383 454 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 KCNA5P22460 613 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 CDC25BP30305 580 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 GPD2P43304 727 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 BCAT1P54687 386 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 EPHB3P54753 998 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 USP46P62068 366 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
CBWD3-206ENST00000478048 NTHL1P78549 312 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 FMO1Q01740 532 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
CBWD3-206ENST00000478048 STILQ15468 1287 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 DNAJB7Q7Z6W7 309 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-206ENST00000478048 PIGZQ86VD9 579 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 SPC24Q8NBT2 197 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 HAUS4Q9H6D7 363 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 PCDHGC3Q9UN70 934 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 PATJQ8NI35 1801 aa12.1□□□□□ -0.47
CBWD3-206ENST00000478048 SLC38A8A6NNN8 435 aa12.09□□□□□ -0.47
CBWD3-206ENST00000478048 TNFRSF10BO14763 440 aa12.09□□□□□ -0.47
CBWD3-206ENST00000478048 PAPLNO95428 1278 aa12.09□□□□□ -0.47
CBWD3-206ENST00000478048 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-206ENST00000478048 HNRNPA1P09651 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
CBWD3-206ENST00000478048 HMGA1P17096 107 aaKnown RBP12.09□□□□□ -0.47
CBWD3-206ENST00000478048 ANXA13P27216 316 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms