RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 WDCPQ9H6R7 721 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 CHMP5Q9NZZ3 219 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 SERGEFQ9UGK8 458 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 ZDHHC8Q9ULC8 765 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 USP32Q8NFA0 1604 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 MED14O60244 1454 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 CPS1P31327 1500 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 NSD2O96028 1365 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 FSD2A1L4K1 749 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 ANKRD62A6NC57 917 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 SNUPNO95149 360 aaKnown RBP5.43□□□□□ -1.54
LMBR1-216ENST00000477983 HNRNPCP07910 306 aaKnown RBP eCLIP5.43□□□□□ -1.54
LMBR1-216ENST00000477983 JUPP14923 745 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 ITGALP20701 1170 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 PHKA1P46020 1223 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 HK3P52790 923 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 TMEM240Q5SV17 173 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 RBM20Q5T481 1227 aaKnown RBP5.43□□□□□ -1.54
LMBR1-216ENST00000477983 C11orf87Q6NUJ2 197 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
LMBR1-216ENST00000477983 HEATR3Q7Z4Q2 680 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.43□□□□□ -1.544e-6■■■□□ 14.8
LMBR1-216ENST00000477983 PRR18Q8N4B5 295 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 VGLL2Q8N8G2 317 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 RUNDC1Q96C34 613 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 MYH16Q9H6N6 1097 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 ABCF2Q9UG63 623 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 RAD54BQ9Y620 910 aa5.43□□□□□ -1.54
LMBR1-216ENST00000477983 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 PPIP5K1Q6PFW1 1433 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 FYB1O15117 783 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 NXPH3O95157 252 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 KIF20AO95235 890 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 FTLP02792 175 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 FAM163BP0C2L3 166 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 CHRM3P20309 590 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 MTHFSP49914 203 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 KRTAP10-9P60411 292 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 TBCCQ15814 346 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 PROSER3Q2NL68 480 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 CEP85Q6P2H3 762 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 ANKRD16Q6P6B7 361 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 USP45Q70EL2 814 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 USP37Q86T82 979 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 DTX2Q86UW9 622 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 CCDC146Q8IYE0 955 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 ATRIPQ8WXE1 791 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 TBC1D5Q92609 795 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 DDX17Q92841 729 aaKnown RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 SNX21Q969T3 373 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 REPS1Q96D71 796 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 CFAP53Q96M91 514 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 TINAGL1Q9GZM7 467 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 ARHGEF3Q9NR81 526 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 FEZ2Q9UHY8 353 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 CD163L1Q9NR16 1453 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF142P52746 1687 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 USP19O94966 1318 aa5.42□□□□□ -1.54
LMBR1-216ENST00000477983 IBTKQ9P2D0 1353 aaPredicted RBP5.42□□□□□ -1.54
LMBR1-216ENST00000477983 ATP7BP35670 1465 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 VPS4BO75351 444 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 JTBO76095 146 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 POU2F2P09086 479 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 EBLN1P0CF75 366 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 PRR35P0CG20 571 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 CD6P30203 668 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 HDAC1Q13547 482 aaPredicted RBP5.41□□□□□ -1.54
LMBR1-216ENST00000477983 MTX3Q5HYI7 312 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 TEDDM1Q5T9Z0 273 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 C20orf194Q5TEA3 1177 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 CPA6Q8N4T0 437 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 ZCRB1Q8TBF4 217 aaKnown RBP5.41□□□□□ -1.54
LMBR1-216ENST00000477983 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 ANP32BQ92688 251 aaKnown RBP5.41□□□□□ -1.54
LMBR1-216ENST00000477983 TNPO1Q92973 898 aaKnown RBP5.41□□□□□ -1.54
LMBR1-216ENST00000477983 MRPL46Q9H2W6 279 aaKnown RBP5.41□□□□□ -1.54
LMBR1-216ENST00000477983 SERHLQ9NQF3 203 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 HOMER2Q9NSB8 354 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 LMBRD1Q9NUN5 540 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 BTBD3Q9Y2F9 522 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 IL16Q14005 1332 aa5.41□□□□□ -1.54
LMBR1-216ENST00000477983 NPHP4O75161 1426 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 APAF1O14727 1248 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF213O14771 459 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 IPO8O15397 1037 aaKnown RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 IL33O95760 270 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 GNAI2P04899 355 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 TPM2P07951 284 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 TYRP14679 529 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 NDUFB7P17568 137 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 GCLCP48506 637 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 MAP2K6P52564 334 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 RARSP54136 660 aaKnown RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 MAPK7Q13164 816 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 BOP1Q14137 746 aaKnown RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF618Q5T7W0 954 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 VPS53Q5VIR6 699 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms