RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ANLNQ9NQW6 1124 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 CHST7Q9NS84 486 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 TMEM161AQ9NX61 479 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 MYO1FO00160 1098 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 ZMYND10O75800 440 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 BCAT1P54687 386 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 SEMA3BQ13214 749 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 IQCKQ8N0W5 287 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
PRPF39-203ENST00000477626 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
PRPF39-203ENST00000477626 MTCL1Q9Y4B5 1905 aaKnown RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 H3BQF6 201 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 TTI1O43156 1089 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 CD48P09326 243 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 DNAJC24Q6P3W2 148 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 TEKT4Q8WW24 435 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 FTHL17Q9BXU8 183 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 TBC1D13Q9NVG8 400 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 FAM92AA1XBS5 289 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 MYBPHLA2RUH7 354 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 KRT3P12035 628 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 CHRNA3P32297 505 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 PSMC1P62191 440 aaKnown RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 MFSD7Q6UXD7 560 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 EMC1Q8N766 993 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 LRRC4CQ9HCJ2 640 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 KRIT1O00522 736 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 ART4Q93070 314 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
PRPF39-203ENST00000477626 PNPLA8Q9NP80 782 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
PRPF39-203ENST00000477626 CLDN5O00501 218 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 NPR3P17342 541 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 MIPP30301 263 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 PTK6Q13882 451 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 SLC9A4Q6AI14 798 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 RCOR2Q8IZ40 523 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 MDM4O15151 490 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 LIASO43766 372 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 HEXIM1O94992 359 aaKnown RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 RALAP11233 206 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 FGFR3P22607 806 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 LHX1P48742 406 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 NFX1Q12986 1120 aaKnown RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 JAMLQ86YT9 394 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 RTP4Q96DX8 246 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 NPY6RQ99463 290 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 CWH43Q9H720 699 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 WDR6Q9NNW5 1121 aaKnown RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 KIF26AQ9ULI4 1882 aaPredicted RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 PPFIA2O75334 1257 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 KDELR1P24390 212 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 PAFAH1B1P43034 410 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 DPYSL3Q14195 570 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 CASP8Q14790 479 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 CCNG2Q16589 344 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 TNFAIP8L3Q5GJ75 292 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 SPDYCQ5MJ68 293 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 RELL1Q8IUW5 271 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
PRPF39-203ENST00000477626 APBB2Q92870 758 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 CNPY3Q9BT09 278 aa12.74□□□□□ -0.37
PRPF39-203ENST00000477626 A8MXQ7 604 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 PGFP49763 221 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 RNASE9P60153 205 aaKnown RBP12.73□□□□□ -0.37
PRPF39-203ENST00000477626 EMBQ6PCB8 327 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 FAM35AQ86V20 835 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 ESYT3A0FGR9 886 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 NRP1O14786 923 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
PRPF39-203ENST00000477626 CUL1Q13616 776 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 ARHGEF6Q15052 776 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms