RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 TCP10LQ8TDR4 215 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF669Q96BR6 464 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 SLITRK1Q96PX8 696 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 FOXP3Q9BZS1 431 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 C12orf65Q9H3J6 166 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RNPEPQ9H4A4 650 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 MROH8Q9H579 483 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PCDH9Q9HC56 1237 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 EEF2KO00418 725 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RPS6KA5O75582 802 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 AMPD1P23109 780 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RBL1P28749 1068 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 FASTKD3Q14CZ7 662 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 GRIK4Q16099 956 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CNGA2Q16280 664 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PCSK7Q16549 785 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 GRAMD1BQ3KR37 738 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PTPN20Q4JDL3 420 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CELF3Q5SZQ8 465 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 ERMARDQ5T6L9 678 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 NLRP9Q7RTR0 991 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 MTDHQ86UE4 582 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 EDEM1Q92611 657 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 VCXQ9H320 206 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 AVILO75366 819 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 C4BPAP04003 597 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 HMGCRP04035 888 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CCDC130P13994 396 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 EIF4BP23588 611 aaKnown RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF484Q5JVG2 852 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 ART4Q93070 314 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 SGF29Q96ES7 293 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-204ENST00000477421 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 B3GNT5Q9BYG0 378 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 RPS6KL1Q9Y6S9 549 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 LIASO43766 372 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 BGNP21810 368 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 RPA3P35244 121 aaPredicted RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 PGM1P36871 562 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CASP2P42575 452 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 ABCG1P45844 678 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 NOVP48745 357 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 TAF6P49848 677 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF157P51786 506 aaPredicted RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 NRLP54845 237 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 STX3Q13277 289 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 KIAA1841Q6NSI8 718 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CPSF2Q9P2I0 782 aaKnown RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 MYH3P11055 1940 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 IQCA1LA6NCM1 817 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 B2RBV5 119 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CBX6O95503 412 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 TCF4P15884 667 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 ZFXP17010 805 aaPredicted RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 MMP8P22894 467 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 KDELR1P24390 212 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 DRG2P55039 364 aaKnown RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 STILQ15468 1287 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 FASTKD1Q53R41 847 aaKnown RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 SH2D4BQ5SQS7 431 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 EIF1ADQ8N9N8 165 aaKnown RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 SLC2A14Q8TDB8 520 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 TFAP2BQ92481 460 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CPXM1Q96SM3 734 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 THTPAQ9BU02 230 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 VCX3BQ9H321 246 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 GTSE1Q9NYZ3 720 aa11.46□□□□□ -0.57
COL27A1-204ENST00000477421 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
COL27A1-204ENST00000477421 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 PPP1R12AO14974 1030 aaPredicted RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 CETPP11597 493 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 GRIK1P39086 918 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 BEX3Q00994 111 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 KBTBD12Q3ZCT8 623 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 ZC3H12AQ5D1E8 599 aaKnown RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 FBXO47Q5MNV8 452 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 LBX2Q6XYB7 198 aa11.46□□□□□ -0.58
COL27A1-204ENST00000477421 PPWD1Q96BP3 646 aaKnown RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 PABPC5Q96DU9 382 aaKnown RBP11.46□□□□□ -0.58
COL27A1-204ENST00000477421 GMLQ99445 158 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms