RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 GAS6Q14393 721 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 SNX30Q5VWJ9 437 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 KRT39Q6A163 491 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 SPOPLQ6IQ16 392 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 FOXR2Q6PJQ5 311 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 ADSSL1Q8N142 457 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 NUP93Q8N1F7 819 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 ARL14EPQ8N8R7 260 aaPredicted RBP24.03■■□□□ 1.44
CNIH4-208ENST00000477413 PDZD8Q8NEN9 1154 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 OSCP1Q8WVF1 389 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 SMARCE1Q969G3 411 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 SLITRK1Q96PX8 696 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 TRPC7Q9HCX4 862 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 ZSCAN32Q9NX65 697 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 R4GN57 208 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 MYH10P35580 1976 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 KIAA1549LQ6ZVL6 1849 aa24.03■■□□□ 1.44
CNIH4-208ENST00000477413 OTOL1A6NHN0 477 aaPredicted RBP24.02■■□□□ 1.44
CNIH4-208ENST00000477413 CETN3O15182 167 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 LMNAP02545 664 aaKnown RBP24.02■■□□□ 1.44
CNIH4-208ENST00000477413 EPB41P11171 864 aaKnown RBP24.02■■□□□ 1.44
CNIH4-208ENST00000477413 TUBP50607 506 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 TMEM196Q5HYL7 178 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 CC2D1AQ6P1N0 951 aaPredicted RBP24.02■■□□□ 1.44
CNIH4-208ENST00000477413 SPEM1Q8N4L4 309 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 ELMO3Q96BJ8 720 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 CYP2S1Q96SQ9 504 aa24.02■■□□□ 1.44
CNIH4-208ENST00000477413 SPTBN4Q9H254 2564 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 TRDMT1O14717 391 aaKnown RBP24.01■■□□□ 1.43
CNIH4-208ENST00000477413 STX10O60499 249 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 HDCP19113 662 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 FKBP3Q00688 224 aaKnown RBP24.01■■□□□ 1.43
CNIH4-208ENST00000477413 CSTF1Q05048 431 aaKnown RBP24.01■■□□□ 1.43
CNIH4-208ENST00000477413 TAF10Q12962 218 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 ACOT1Q86TX2 421 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 ZMIZ2Q8NF64 920 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 SH3RF2Q8TEC5 729 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 ATP2A3Q93084 1043 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 DUSP9Q99956 384 aaKnown RBP24.01■■□□□ 1.43
CNIH4-208ENST00000477413 EBF3Q9H4W6 596 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 KRT82Q9NSB4 513 aa24.01■■□□□ 1.43
CNIH4-208ENST00000477413 MYO16Q9Y6X6 1858 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 CILPO75339 1184 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 ZDHHC11BP0C7U3 371 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 YWHAQP27348 245 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 PPP1R2P41236 205 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 MXI1P50539 228 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 SLC5A3P53794 718 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 ZXDBP98169 803 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 PPP2R5DQ14738 602 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 EML3Q32P44 896 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 TRIM68Q6AZZ1 485 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 CPA6Q8N4T0 437 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 FBXL13Q8NEE6 735 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 KCNK16Q96T55 309 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 TSG101Q99816 390 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 PNPLA8Q9NP80 782 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 COQ4Q9Y3A0 265 aa24■■□□□ 1.43
CNIH4-208ENST00000477413 ARSAP15289 507 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 TRIM21P19474 475 aaKnown RBP23.99■■□□□ 1.43
CNIH4-208ENST00000477413 PMS1P54277 932 aaKnown RBP23.99■■□□□ 1.43
CNIH4-208ENST00000477413 AMPD2Q01433 879 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 PON2Q15165 354 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 TTC39CQ8N584 583 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 SUMF1Q8NBK3 374 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 SLC2A14Q8TDB8 520 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 WHAMMQ8TF30 809 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 TWNKQ96RR1 684 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 HNRNPABQ99729 332 aaKnown RBP23.99■■□□□ 1.43
CNIH4-208ENST00000477413 SMOQ99835 787 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 NT5C1AQ9BXI3 368 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 ECT2Q9H8V3 914 aa23.99■■□□□ 1.43
CNIH4-208ENST00000477413 KINO60870 393 aaKnown RBP23.98■■□□□ 1.43
CNIH4-208ENST00000477413 AP1G2O75843 785 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 CLSTN1O94985 981 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 CCDC130P13994 396 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 HOXA6P31267 233 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 NRLP54845 237 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 ANKRD40Q6AI12 368 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 CCDC150Q8NCX0 1101 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 TTC8Q8TAM2 541 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 SEMA4DQ92854 862 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 MED10Q9BTT4 135 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 RNF38Q9H0F5 515 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 EPC1Q9H2F5 836 aa23.98■■□□□ 1.43
CNIH4-208ENST00000477413 RBM12Q9NTZ6 932 aaKnown RBP23.98■■□□□ 1.43
CNIH4-208ENST00000477413 DUS2Q9NX74 493 aaKnown RBP23.98■■□□□ 1.43
CNIH4-208ENST00000477413 PSMA7O14818 248 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 FSTL4Q6MZW2 842 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 Q6ZS52 159 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 DDX42Q86XP3 938 aaKnown RBP eCLIP23.97■■□□□ 1.43
CNIH4-208ENST00000477413 C12orf29Q8N999 325 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 ERCC4Q92889 916 aaPredicted RBP23.97■■□□□ 1.43
CNIH4-208ENST00000477413 FBXO32Q969P5 355 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 EEF2KMTQ96G04 330 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 DHTKD1Q96HY7 919 aaPredicted RBP23.97■■□□□ 1.43
CNIH4-208ENST00000477413 ZFRQ96KR1 1074 aaKnown RBP23.97■■□□□ 1.43
CNIH4-208ENST00000477413 RAB20Q9NX57 234 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 WNT6Q9Y6F9 365 aa23.97■■□□□ 1.43
CNIH4-208ENST00000477413 DMXL1Q9Y485 3027 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms