RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
VARS2-209ENST00000477288 ACOT1Q86TX2 421 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 CAAP1Q9H8G2 361 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 SOX13Q9UN79 622 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 SERPINB1P30740 379 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 OXCT1P55809 520 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 BFSP2Q13515 415 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 PPIL6Q8IXY8 311 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 SATB2Q9UPW6 733 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 ZNF609O15014 1411 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 SYNCRIPO60506 623 aaKnown RBP19.23■□□□□ 0.67
VARS2-209ENST00000477288 CSTF3Q12996 717 aaKnown RBP19.23■□□□□ 0.67
VARS2-209ENST00000477288 CUL2Q13617 745 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 CYP51A1Q16850 503 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 DEFB128Q7Z7B8 93 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 KRT75O95678 551 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 DNAJB2P25686 324 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 CLCN3P51790 818 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 TTC33Q6PID6 262 aaPredicted RBP19.23■□□□□ 0.67
VARS2-209ENST00000477288 CCDC103Q8IW40 242 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 DLGAP3O95886 979 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 PYGMP11217 842 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 TGM2P21980 687 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 FBXO16Q8IX29 292 aaPredicted RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 TRPC5OSA6NMA1 111 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 SUPT7LO94864 414 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 CENPCQ03188 943 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 KLC1Q07866 573 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 RUBCNQ92622 972 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 TUBGCP3Q96CW5 907 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 TUBE1Q9UJT0 475 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 TMEM253P0C7T8 217 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 ERVK-10P10266 1014 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 C4orf22Q6V702 233 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 AGBL3Q8NEM8 1001 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 UTP6Q9NYH9 597 aaKnown RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 HOXA2O43364 376 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 DYRK3O43781 588 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 CPSF4O95639 269 aaKnown RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 PCNAP12004 261 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 HPGDP15428 266 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 CENPLQ8N0S6 344 aaPredicted RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 TRIM8Q9BZR9 551 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 USP42Q9H9J4 1324 aaKnown RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 ICAM1P05362 532 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 CYP2C8P10632 490 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 ATP6V1B1P15313 513 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 ZNF284Q2VY69 593 aa19.22■□□□□ 0.67
VARS2-209ENST00000477288 RUVBL2Q9Y230 463 aaKnown RBP19.22■□□□□ 0.67
VARS2-209ENST00000477288 EFEMP1Q12805 493 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 MRNIPQ6NTE8 343 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ADGRF2Q8IZF7 708 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 FBXO28Q9NVF7 368 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 NMRK1Q9NWW6 199 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 SERPINB5P36952 375 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ZNF438Q7Z4V0 828 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ZNF786Q8N393 782 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 RDM1Q8NG50 284 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 MRPS26Q9BYN8 205 aaKnown RBP19.21■□□□□ 0.67
VARS2-209ENST00000477288 CIPCQ9C0C6 399 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 MTMR12Q9C0I1 747 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 VPS33BQ9H267 617 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 OSGEPL1Q9H4B0 414 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ALG6Q9Y672 507 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 VPS26AO75436 327 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 MAP3K6O95382 1288 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 TFE3P19532 575 aaPredicted RBP19.21■□□□□ 0.67
VARS2-209ENST00000477288 POU1F1P28069 291 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 SERPINB3P29508 390 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 RRM2P31350 389 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 FDFT1P37268 417 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 EPHB3P54753 998 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ZNF484Q5JVG2 852 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 TRPM8Q7Z2W7 1104 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 DNAJC9Q8WXX5 260 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 TRPM5Q9NZQ8 1165 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 VPS28Q9UK41 221 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 ARRDC4Q8NCT1 418 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 NSL1Q96IY1 281 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 EPB41L4AQ9HCS5 686 aaPredicted RBP19.21■□□□□ 0.67
VARS2-209ENST00000477288 SPATA31A1Q5TZJ5 1347 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 GAS2O43903 313 aaKnown RBP19.21■□□□□ 0.67
VARS2-209ENST00000477288 GSTM1P09488 218 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 EZH2Q15910 746 aaKnown RBP19.21■□□□□ 0.67
VARS2-209ENST00000477288 KLHDC7AQ5VTJ3 777 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 MAGED4Q96JG8 741 aa19.21■□□□□ 0.67
VARS2-209ENST00000477288 SPATA31A6Q5VVP1 1343 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 P4HA2O15460 535 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 MYL4P12829 197 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 GEMIN4P57678 1058 aaKnown RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 CNPY4Q8N129 248 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 CNTNAP5Q8WYK1 1306 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 FAM47E-STBD1D6RA91 191 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 STRNO43815 780 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 NTSR2O95665 410 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 RIN2Q8WYP3 895 aaPredicted RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 EMILIN2Q9BXX0 1053 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 PPCSQ9HAB8 311 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms