RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 NRLP54845 237 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 GRSF1Q12849 480 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCM2-208ENST00000476594 TAF10Q12962 218 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 USP4Q13107 963 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 RUNX3Q13761 415 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 MORC3Q14149 939 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 ARL14EPQ8N8R7 260 aaPredicted RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 TTC16Q8NEE8 873 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 SLC2A14Q8TDB8 520 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 OSCP1Q8WVF1 389 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 NELFBQ8WX92 580 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 RSPRY1Q96DX4 576 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 HNRNPABQ99729 332 aaKnown RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 SMG9Q9H0W8 520 aaKnown RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 LMAN1LQ9HAT1 526 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 TLR8Q9NR97 1041 aaKnown RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 FAM49BQ9NUQ9 324 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 FAM86C1Q9NVL1 165 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 DUS2Q9NX74 493 aaKnown RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 DACH1Q9UI36 760 aa10.82□□□□□ -0.68
CCM2-208ENST00000476594 ZNF638Q14966 1978 aaKnown RBP10.82□□□□□ -0.68
CCM2-208ENST00000476594 TRIM49BA6NDI0 452 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GFRA3O60609 400 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GADD45BO75293 160 aaPredicted RBP10.81□□□□□ -0.68
CCM2-208ENST00000476594 MBL2P11226 248 aaPredicted RBP10.81□□□□□ -0.68
CCM2-208ENST00000476594 CCDC130P13994 396 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 ADORA2BP29275 332 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 PSEN1P49768 467 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 MAP3K7CLP57077 242 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 SLC7A9P82251 487 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 ZNF77Q15935 545 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 ISM2Q6H9L7 571 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 FUKQ8N0W3 1084 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 SH3RF2Q8TEC5 729 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 EEF2KMTQ96G04 330 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 ZFYVE19Q96K21 471 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 HEXIM2Q96MH2 286 aaKnown RBP10.81□□□□□ -0.68
CCM2-208ENST00000476594 NT5C1BQ96P26 610 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 CDK5RAP1Q96SZ6 601 aaKnown RBP10.81□□□□□ -0.68
CCM2-208ENST00000476594 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 SDCBP2Q9H190 292 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 CSNK1G1Q9HCP0 422 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 CISHQ9NSE2 258 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GTSE1Q9NYZ3 720 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 GCNT4Q9P109 453 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 KIAA1468Q9P260 1216 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 TBC1D14Q9P2M4 693 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 CCL26Q9Y258 94 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 COQ4Q9Y3A0 265 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 NME7Q9Y5B8 376 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 PTPRDP23468 1912 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 TICRRQ7Z2Z1 1910 aa10.81□□□□□ -0.68
CCM2-208ENST00000476594 DENND4CQ5VZ89 1909 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 C2orf78A6NCI8 922 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 BIN1O00499 593 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 PMM2O15305 246 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 ATG13O75143 517 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 OAS1P00973 400 aaKnown RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 SP9P0CG40 484 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 DRD1P21728 446 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 FMO5P49326 533 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 USP46P62068 366 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 CUL2Q13617 745 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 TPD52L1Q16890 204 aaPredicted RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 ZNF394Q53GI3 561 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 SPEM1Q8N4L4 309 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 ATRIPQ8WXE1 791 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 SLC35C1Q96A29 364 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 OTUB2Q96DC9 234 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 TMEM176AQ96HP8 235 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 FAM81BQ96LP2 452 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 EBF3Q9H4W6 596 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCM2-208ENST00000476594 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 LSM7Q9UK45 103 aaKnown RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 SH3BP1Q9Y3L3 701 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 MTF2Q9Y483 593 aaPredicted RBP10.8□□□□□ -0.68
CCM2-208ENST00000476594 PCDHGA2Q9Y5H1 932 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCM2-208ENST00000476594 CPQQ9Y646 472 aa10.8□□□□□ -0.68
CCM2-208ENST00000476594 OBSL1O75147 1896 aa10.79□□□□□ -0.68
CCM2-208ENST00000476594 FAM92AA1XBS5 289 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms