RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 PSMA7O14818 248 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 LAMTOR5O43504 91 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 RTN3O95197 1032 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 TGM1P22735 817 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 ARHGAP8P85298 464 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 LMNB2Q03252 620 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 PPP3CAQ08209 521 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 LRRC32Q14392 662 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 FAM35AQ86V20 835 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 RALGPS2Q86X27 583 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 TAS1R2Q8TE23 839 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 SLITRK1Q96PX8 696 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 TTLL2Q9BWV7 592 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 SDCBP2Q9H190 292 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 DMAP1Q9NPF5 467 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 KRT82Q9NSB4 513 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 GTSE1Q9NYZ3 720 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 TRPM5Q9NZQ8 1165 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 FBXO4Q9UKT5 387 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 CCL26Q9Y258 94 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 PCDHGA2Q9Y5H1 932 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 NBEAQ8NFP9 2946 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 SHISA7A6NL88 538 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 CLDN5O00501 218 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 CCNE1P24864 410 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 CTHP32929 405 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 SOX9P48436 509 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 NDST1P52848 882 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 USP46P62068 366 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 IFRD2Q12894 506 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 MTF1Q14872 753 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 ITPRIPL2Q3MIP1 535 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 ACOT1Q86TX2 421 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 RTKNQ9BST9 563 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
NUDCD3-206ENST00000475952 FASNP49327 2511 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 TRIM49BA6NDI0 452 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 AP1G2O75843 785 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 CCDC130P13994 396 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 HDCP19113 662 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 YWHAQP27348 245 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 CACNA2D1P54289 1103 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 MCCD1P59942 119 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 AMPD2Q01433 879 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 TNK2Q07912 1038 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 USP4Q13107 963 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ORC1Q13415 861 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 PPP2R5DQ14738 602 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 PDGFRLQ15198 375 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ZNF77Q15935 545 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ZC3H3Q8IXZ2 948 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 FUKQ8N0W3 1084 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 CRYBG2Q8N1P7 616 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ZBTB44Q8NCP5 570 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 TTC16Q8NEE8 873 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC2A14Q8TDB8 520 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 NELL1Q92832 810 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 DHTKD1Q96HY7 919 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 CHRDQ9H2X0 955 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 PARD6AQ9NPB6 346 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■■■■ 71.8
NUDCD3-206ENST00000475952 TMEM30AQ9NV96 361 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 GCNT4Q9P109 453 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 MAN1B1Q9UKM7 699 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
NUDCD3-206ENST00000475952 ZNF840PA6NDX5 716 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 LILRB5O75023 590 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ABL1P00519 1130 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 TCF3P15923 654 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 CD58P19256 250 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms