RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ZNF280DQ6N043 979 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 DCUN1D2Q6PH85 259 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 SCN4BQ8IWT1 228 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 FEZF2Q8TBJ5 459 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 KHSRPQ92945 711 aaKnown RBP eCLIP19.03■□□□□ 0.64
ATG4B-217ENST00000475693 SELENOOQ9BVL4 669 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 CARD6Q9BX69 1037 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 CHST7Q9NS84 486 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 SMARCAL1Q9NZC9 954 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 EHD2Q9NZN4 543 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 USTQ9Y2C2 406 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 MRFAP1Q9Y605 127 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 KIAA1671Q9BY89 1806 aa19.03■□□□□ 0.64
ATG4B-217ENST00000475693 HHLA1C9JL84 531 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 XPO1O14980 1071 aaKnown RBP19.02■□□□□ 0.64
ATG4B-217ENST00000475693 KRT3P12035 628 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 PAX3P23760 479 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 CA8P35219 290 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 GRIK1P39086 918 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 TEX35Q5T0J7 233 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.64
ATG4B-217ENST00000475693 NT5DC3Q86UY8 548 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 C3orf20Q8ND61 904 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 FBXO22Q8NEZ5 403 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.64
ATG4B-217ENST00000475693 UVRAGQ9P2Y5 699 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 TMEM191CA6NGB0 347 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 SOD2P04179 222 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 PBX2P40425 430 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 TUBB4BP68371 445 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 PSMD5Q16401 504 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 MEI1Q5TIA1 1274 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 RASIP1Q5U651 963 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 OLFML1Q6UWY5 402 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 SLFN11Q7Z7L1 901 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 IPO4Q8TEX9 1081 aaKnown RBP19.02■□□□□ 0.64
ATG4B-217ENST00000475693 COG1Q8WTW3 980 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 KRT35Q92764 455 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 MCRS1Q96EZ8 462 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 TRIM11Q96F44 468 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 SMARCD1Q96GM5 515 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 CLSTN3Q9BQT9 956 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 CERS4Q9HA82 394 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 ATP8B3O60423 1300 aa19.02■□□□□ 0.64
ATG4B-217ENST00000475693 NLRC5Q86WI3 1866 aa19.02■□□□□ 0.63
ATG4B-217ENST00000475693 ARHGEF37A1IGU5 675 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 USP17L7P0C7H9 530 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 TFE3P19532 575 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-217ENST00000475693 FLT3P36888 993 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 TKTL1P51854 596 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 ELAVL2Q12926 359 aaKnown RBP19.01■□□□□ 0.63
ATG4B-217ENST00000475693 LLGL1Q15334 1064 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 HFE2Q6ZVN8 426 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 PEX26Q7Z412 305 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 CAPZA3Q96KX2 299 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 SLC9A7Q96T83 725 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 ABCB6Q9NP58 842 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 PCDHB12Q9Y5F1 795 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 TRANK1O15050 2925 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 WDR27A2RRH5 827 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 MYO1FO00160 1098 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 SPATA31D3P0C874 917 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 PGFP49763 221 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 DUSP4Q13115 394 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 TUBB2AQ13885 445 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 ZNF268Q14587 947 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-217ENST00000475693 SPATA31D4Q6ZUB0 917 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 ANKS3Q6ZW76 656 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 SPATA18Q8TC71 538 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 TUBB2BQ9BVA1 445 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 ULBP1Q9BZM6 244 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 JRKLQ9Y4A0 524 aa19.01■□□□□ 0.63
ATG4B-217ENST00000475693 C5orf42Q9H799 3197 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 SIGLEC16A6NMB1 481 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 MTA2O94776 668 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 DNAJB1P25685 340 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 ADCY1Q08828 1119 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 TCEAL1Q15170 157 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 AADACL2Q6P093 401 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 DCP1BQ8IZD4 617 aaKnown RBP19■□□□□ 0.63
ATG4B-217ENST00000475693 CLP1Q92989 425 aaKnown RBP19■□□□□ 0.63
ATG4B-217ENST00000475693 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 DNAI2Q9GZS0 605 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
ATG4B-217ENST00000475693 STRIP2Q9ULQ0 834 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 MTMR11A4FU01 709 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 LINC01553A4QN01 128 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 CA3P07451 260 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 AMPD2Q01433 879 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 SLC6A3Q01959 620 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 ROR1Q01973 937 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 C15orf59Q2T9L4 293 aaPredicted RBP19■□□□□ 0.63
ATG4B-217ENST00000475693 DDX53Q86TM3 631 aaKnown RBP19■□□□□ 0.63
ATG4B-217ENST00000475693 MS4A14Q96JA4 679 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 CFAP57Q96MR6 1250 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 LRRC4Q9HBW1 653 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 CSNK1G1Q9HCP0 422 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 NR2E3Q9Y5X4 410 aa19■□□□□ 0.63
ATG4B-217ENST00000475693 CTNNB1P35222 781 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms