RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	EMB	Q6PCB8	327 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	FOXR2	Q6PJQ5	311 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651		Q6ZSN1	163 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	C15orf52	Q6ZUT6	534 aa	Known RBP	4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	GSPT2	Q8IYD1	628 aa	Known RBP	4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	SHCBP1	Q8NEM2	672 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	COG1	Q8WTW3	980 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	TBC1D5	Q92609	795 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	SYN2	Q92777	582 aa	Predicted RBP	4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	LPP	Q93052	612 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	TEKT1	Q969V4	418 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	CLIP3	Q96DZ5	547 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	CEP95	Q96GE4	821 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	CCDC17	Q96LX7	622 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	DRC1	Q96MC2	740 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	LSM14B	Q9BX40	385 aa	Known RBP	4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	BTBD2	Q9BX70	525 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	CD244	Q9BZW8	370 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	COA1	Q9GZY4	146 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	UBA5	Q9GZZ9	404 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	EPC1	Q9H2F5	836 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	ANKZF1	Q9H8Y5	726 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	METTL14	Q9HCE5	456 aa	Known RBP	4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	ST7	Q9NRC1	585 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	GOLGA6A	Q9NYA3	693 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	MTMR4	Q9NYA4	1195 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	CEP72	Q9P209	647 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651		Q9UFV3	132 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	SERPINB13	Q9UIV8	391 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	SNX12	Q9UMY4	172 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	L1RE1	Q9UN81	338 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	C4A	P0C0L4	1744 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	C4B	P0C0L5	1744 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	MYH15	Q9Y2K3	1946 aa		4.54	□□□□□ -1.68
RBM39-229	ENST00000475651	DUOX1	Q9NRD9	1551 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	FAM205A	Q6ZU69	1335 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	NWD2	Q9ULI1	1742 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	GOLGA6L10	A0A0M3HER8	536 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	GRID2IP	A4D2P6	1211 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MYMK	A6NI61	221 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ZBTB5	O15062	677 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	KLRC4	O43908	158 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	FLOT1	O75955	427 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MOCS3	O95396	460 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	PLA2G4B	P0C869	781 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	PDHB	P11177	359 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	PABPC1	P11940	636 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	FCER1A	P12319	257 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	IL1R1	P14778	569 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	LMO1	P25800	156 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ANXA13	P27216	316 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	USP8	P40818	1118 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SLC1A4	P43007	532 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SESN2	P58004	480 aa	Predicted RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	HERVK_113	P62684	666 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	GPSM2	P81274	684 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ITIH3	Q06033	890 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	COASY	Q13057	564 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	RAPGEF1	Q13905	1077 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	TNIP1	Q15025	636 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	EIF4H	Q15056	248 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	RPS6KA1	Q15418	735 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	NAALADL2	Q58DX5	795 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	DNAJC21	Q5F1R6	531 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	HABP4	Q5JVS0	413 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	CFAP58	Q5T655	872 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	IGFL4	Q6B9Z1	124 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MRM1	Q6IN84	353 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	PDXDC1	Q6P996	788 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	KCNT2	Q6UVM3	1135 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ARHGAP36	Q6ZRI8	547 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	B4GALNT4	Q76KP1	1039 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	GPBP1	Q86WP2	473 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SPATS2	Q86XZ4	545 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	TMPRSS6	Q8IU80	811 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SYCE1	Q8N0S2	351 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MMGT1	Q8N4V1	131 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ARFGAP2	Q8N6H7	521 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SLC44A5	Q8NCS7	719 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	CCDC26	Q8TAB7	109 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	CALML6	Q8TD86	181 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	IFT81	Q8WYA0	676 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.53	□□□□□ -1.68	2e-8	■■■■■ 32.8
RBM39-229	ENST00000475651	FBXW5	Q969U6	566 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	COA7	Q96BR5	231 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	LRRC45	Q96CN5	670 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	CCDC43	Q96MW1	224 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MED15	Q96RN5	788 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	PNKP	Q96T60	521 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	NAP1L3	Q99457	506 aa	Predicted RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	MXD3	Q9BW11	206 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	DHX36	Q9H2U1	1008 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	RIOX1	Q9H6W3	641 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	SH2D4A	Q9H788	454 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	FAM204A	Q9H8W3	233 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	IPPK	Q9H8X2	491 aa		4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	ZCCHC17	Q9NP64	241 aa	Known RBP	4.53	□□□□□ -1.68
RBM39-229	ENST00000475651	AGPAT5	Q9NUQ2	364 aa		4.53	□□□□□ -1.68

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