RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 HSPA12BQ96MM6 686 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 PNMA5Q96PV4 448 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
NME1-206ENST00000475573 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 SUSD2Q9UGT4 822 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
NME1-206ENST00000475573 GOLGA4Q13439 2230 aaKnown RBP16.3■□□□□ 0.2
NME1-206ENST00000475573 IGHV1OR15-9A0A0B4J2B8 117 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 KALRNO60229 2985 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 HUS1O60921 280 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 ZNF217O75362 1048 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 PCSK1P29120 753 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
NME1-206ENST00000475573 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 SLFN12LQ6IEE8 588 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
NME1-206ENST00000475573 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 ZDHHC5Q9C0B5 715 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 PARVGQ9HBI0 331 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
NME1-206ENST00000475573 KIAA1522Q9P206 1035 aaPredicted RBP16.29■□□□□ 0.2
NME1-206ENST00000475573 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
NME1-206ENST00000475573 CBFA2T3O75081 653 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 FAM13AO94988 1023 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 IL18RAPO95256 599 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 OLFM2O95897 454 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 POLR2BP30876 1174 aaKnown RBP16.28■□□□□ 0.2
NME1-206ENST00000475573 ZNF131P52739 623 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
NME1-206ENST00000475573 RHBDF2Q6PJF5 856 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
NME1-206ENST00000475573 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 UBL7Q96S82 380 aaPredicted RBP16.28■□□□□ 0.2
NME1-206ENST00000475573 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 PCOLCE2Q9UKZ9 415 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 CPQQ9Y646 472 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
NME1-206ENST00000475573 SHROOM3Q8TF72 1996 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 A0A087WV48 116 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 ANKRD63C9JTQ0 380 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 ZBTB24O43167 697 aaPredicted RBP16.27■□□□□ 0.2
NME1-206ENST00000475573 TRAK2O60296 914 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 HOXB2P14652 356 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 GNSP15586 552 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 PPP3CCP48454 512 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 LHX1P48742 406 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 GTF2BQ00403 316 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 GRIK2Q13002 908 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 TMEM119Q4V9L6 283 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 VSTM1Q6UX27 236 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 TMPRSS7Q7RTY8 843 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 OSTM1Q86WC4 334 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 RGL4Q8IZJ4 473 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 ZNF419Q96HQ0 510 aaPredicted RBP16.27■□□□□ 0.2
NME1-206ENST00000475573 PLIN2Q99541 437 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 TTLL2Q9BWV7 592 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
NME1-206ENST00000475573 ZNF840PA6NDX5 716 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 TISP43B9A030 160 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 GABRDO14764 452 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
NME1-206ENST00000475573 ITGB3P05106 788 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
NME1-206ENST00000475573 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 GPBP1Q86WP2 473 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 FOXJ1Q92949 421 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 FIZ1Q96SL8 496 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
NME1-206ENST00000475573 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 CFAP97Q9P2B7 532 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 CYP8B1Q9UNU6 501 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 AGAP1Q9UPQ3 857 aa16.26■□□□□ 0.19
NME1-206ENST00000475573 A0A1W2PQF6 199 aa16.25■□□□□ 0.19
NME1-206ENST00000475573 TK2O00142 265 aa16.25■□□□□ 0.19
NME1-206ENST00000475573 HOXC11O43248 304 aaPredicted RBP16.25■□□□□ 0.19
NME1-206ENST00000475573 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
NME1-206ENST00000475573 NDUFV2P19404 249 aa16.25■□□□□ 0.19
NME1-206ENST00000475573 ANXA13P27216 316 aa16.25■□□□□ 0.19
NME1-206ENST00000475573 NTSR1P30989 418 aa16.25■□□□□ 0.19
NME1-206ENST00000475573 USP46P62068 366 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms