RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MTHFD1LQ6UB35 978 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 Q6ZWC4 215 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 KRT78Q8N1N4 520 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 SDR16C5Q8N3Y7 309 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 ABHD11Q8NFV4 315 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 NTN5Q8WTR8 489 aaPredicted RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 DNMT3BQ9UBC3 853 aaKnown RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 FER1L4A9Z1Z3 1794 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 RHPN2P1A8MT19 583 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 TARM1B6A8C7 271 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 TPH1P17752 444 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 FBLP22087 321 aaKnown RBP7.74□□□□□ -1.17
SMC5-203ENST00000475540 BCAT1P54687 386 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 NPY5RQ15761 445 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 FCRLBQ6BAA4 426 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 ZNF788Q6ZQV5 615 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 UNC13DQ70J99 1090 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 KCTD20Q7Z5Y7 419 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 RAB11FIP4Q86YS3 637 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 RSPRY1Q96DX4 576 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 FSD1LQ9BXM9 530 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 UNKQ9C0B0 810 aaKnown RBP7.74□□□□□ -1.17
SMC5-203ENST00000475540 GEMIN8Q9NWZ8 242 aaKnown RBP7.74□□□□□ -1.17
SMC5-203ENST00000475540 SH3BP4Q9P0V3 963 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 RGS17Q9UGC6 210 aaPredicted RBP7.74□□□□□ -1.17
SMC5-203ENST00000475540 MID2Q9UJV3 735 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 ADAMTS5Q9UNA0 930 aa7.74□□□□□ -1.17
SMC5-203ENST00000475540 RRP9O43818 475 aaKnown RBP7.73□□□□□ -1.17
SMC5-203ENST00000475540 VNN1O95497 513 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 BTF3P20290 206 aaKnown RBP7.73□□□□□ -1.17
SMC5-203ENST00000475540 ACVR2AP27037 513 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 EPHA3P29320 983 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 CARSP49589 748 aaKnown RBP7.73□□□□□ -1.17
SMC5-203ENST00000475540 CPT1AP50416 773 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 ITGA8P53708 1063 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 MRPS21P82921 87 aaKnown RBP7.73□□□□□ -1.17
SMC5-203ENST00000475540 HLTFQ14527 1009 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC5-203ENST00000475540 CCDC142Q17RM4 750 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 PTF1AQ7RTS3 328 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 CCAR1Q8IX12 1150 aaKnown RBP7.73□□□□□ -1.17
SMC5-203ENST00000475540 SNX22Q96L94 193 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 GABRQQ9UN88 632 aa7.73□□□□□ -1.17
SMC5-203ENST00000475540 AQP7P3A6NL99 342 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 PIAS2O75928 621 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 TJP3O95049 919 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 MT-ND5P03915 603 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 IL1R1P14778 569 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 IL1R2P27930 398 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 C21orf58P58505 322 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 ZNF750Q32MQ0 723 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 NAPRTQ6XQN6 538 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 HASPINQ8TF76 798 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 SARGQ9BW04 601 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 BRIP1Q9BX63 1249 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 FAM83DQ9H4H8 585 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 PNPLA8Q9NP80 782 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 ADARB2Q9NS39 739 aaKnown RBP7.72□□□□□ -1.17
SMC5-203ENST00000475540 FAM50BQ9Y247 325 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 DRG1Q9Y295 367 aaKnown RBP7.72□□□□□ -1.17
SMC5-203ENST00000475540 AOX1Q06278 1338 aa7.72□□□□□ -1.17
SMC5-203ENST00000475540 AP4M1O00189 453 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 ZNF213O14771 459 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 CD3EAPO15446 510 aaKnown RBP7.71□□□□□ -1.18
SMC5-203ENST00000475540 IL18RAPO95256 599 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 CTGFP29279 349 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 UQCRC1P31930 480 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 MTHFSP49914 203 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 HOXA4Q00056 320 aaPredicted RBP7.71□□□□□ -1.18
SMC5-203ENST00000475540 SAFBQ15424 915 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMC5-203ENST00000475540 HSP90AB2PQ58FF8 381 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 L1TD1Q5T7N2 865 aaKnown RBP7.71□□□□□ -1.18
SMC5-203ENST00000475540 FCRL6Q6DN72 434 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 RNF44Q7L0R7 432 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 SIRT6Q8N6T7 355 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 INO80BQ9C086 356 aaPredicted RBP7.71□□□□□ -1.18
SMC5-203ENST00000475540 ZNF212Q9UDV6 495 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 CORO2BQ9UQ03 480 aa7.71□□□□□ -1.18
SMC5-203ENST00000475540 F8W8V4 182 aa7.7□□□□□ -1.18
SMC5-203ENST00000475540 RBMXL2O75526 392 aaKnown RBP7.7□□□□□ -1.18
SMC5-203ENST00000475540 STK3Q13188 491 aa7.7□□□□□ -1.18
SMC5-203ENST00000475540 DAG1Q14118 895 aa7.7□□□□□ -1.18
SMC5-203ENST00000475540 ZBTB45Q96K62 511 aaPredicted RBP7.7□□□□□ -1.18
SMC5-203ENST00000475540 TBC1D23Q9NUY8 699 aa7.7□□□□□ -1.18
SMC5-203ENST00000475540 DKK4Q9UBT3 224 aa7.7□□□□□ -1.18
SMC5-203ENST00000475540 FNDC1Q4ZHG4 1894 aaPredicted RBP7.69□□□□□ -1.18
SMC5-203ENST00000475540 PRKCGP05129 697 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 ANXA2P07355 339 aaKnown RBP7.69□□□□□ -1.18
SMC5-203ENST00000475540 MYCLP12524 364 aaPredicted RBP7.69□□□□□ -1.18
SMC5-203ENST00000475540 PIK3CBP42338 1070 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 GATMP50440 423 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 PROK1P58294 105 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 SUMO2P61956 95 aaKnown RBP7.69□□□□□ -1.18
SMC5-203ENST00000475540 CYP4F2P78329 520 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 E2F1Q01094 437 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 PLAG1Q6DJT9 500 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 SEMA6DQ8NFY4 1073 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 REPS1Q96D71 796 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 ZNF668Q96K58 619 aaPredicted RBP7.69□□□□□ -1.18
SMC5-203ENST00000475540 LENG8Q96PV6 779 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms