RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DPH1Q9BZG8 443 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 SEMA4CQ9C0C4 833 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 ZNF518BQ9C0D4 1074 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 TMEM60Q9H2L4 133 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 A1CFQ9NQ94 594 aaKnown RBP5.65□□□□□ -1.5
LTN1-204ENST00000475344 PDGFCQ9NRA1 345 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 TFCP2L1Q9NZI6 479 aa5.65□□□□□ -1.5
LTN1-204ENST00000475344 TUBB4AP04350 444 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 KLF9Q13886 244 aaPredicted RBP5.64□□□□□ -1.51
LTN1-204ENST00000475344 ETFDHQ16134 617 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 KCTD20Q7Z5Y7 419 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 SIRT6Q8N6T7 355 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 RPL36ALQ969Q0 106 aaKnown RBP5.64□□□□□ -1.51
LTN1-204ENST00000475344 SPSB4Q96A44 273 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 SUCLG2Q96I99 432 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 PPP1R9BQ96SB3 815 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 C1QTNF7Q9BXJ2 289 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 STK32BQ9NY57 414 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 LPAR3Q9UBY5 353 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 HDAC9Q9UKV0 1011 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 TPCN1Q9ULQ1 816 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 GABRQQ9UN88 632 aa5.64□□□□□ -1.51
LTN1-204ENST00000475344 KCNU1A8MYU2 1149 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 H7C4K7 107 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 PYCARD-AS1I3L0S3 204 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 TP73O15350 636 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 MTHFSP49914 203 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 RENBPP51606 427 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
LTN1-204ENST00000475344 CCNIQ14094 377 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 RNASE12Q5GAN4 147 aaKnown RBP5.63□□□□□ -1.51
LTN1-204ENST00000475344 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 ZNF425Q6IV72 752 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 APOA5Q6Q788 366 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 CATSPERGQ6ZRH7 1159 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 C1QL2Q7Z5L3 287 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 RITA1Q96K30 269 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 MMS19Q96T76 1030 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 FAM204AQ9H8W3 233 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 C1orf112Q9NSG2 853 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 TCEAL9Q9UHQ7 104 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 AMFRQ9UKV5 643 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 G3BP2Q9UN86 482 aaKnown RBP5.63□□□□□ -1.51
LTN1-204ENST00000475344 USP22Q9UPT9 525 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 DRG1Q9Y295 367 aaKnown RBP5.63□□□□□ -1.51
LTN1-204ENST00000475344 EID1Q9Y6B2 187 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 CDY1Q9Y6F8 540 aa5.63□□□□□ -1.51
LTN1-204ENST00000475344 POC1B-GALNT4F8VUJ3 575 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 UBE2Q2LH0YL09 131 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 MYO1FO00160 1098 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 GCATO75600 419 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 TJP3O95049 919 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 NFE2Q16621 373 aaPredicted RBP5.62□□□□□ -1.51
LTN1-204ENST00000475344 INSCQ1MX18 579 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 MTHFD1LQ6UB35 978 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 CCDC149Q6ZUS6 474 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 KIAA0319LQ8IZA0 1049 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 GALNT4Q8N4A0 578 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 DENND1AQ8TEH3 1009 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 SNX18Q96RF0 628 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 THAP7Q9BT49 309 aaPredicted RBP5.62□□□□□ -1.51
LTN1-204ENST00000475344 KLHL13Q9P2N7 655 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 OGDHLQ9ULD0 1010 aa5.62□□□□□ -1.51
LTN1-204ENST00000475344 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 A6NNZ2 444 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 H7C1Q1 480 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 USP1O94782 785 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 GKP32189 559 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 MMP13P45452 471 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 PTDSS1P48651 473 aaKnown RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 BCAT1P54687 386 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 RPS16P62249 146 aaKnown RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 SSBP2P81877 361 aaPredicted RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 PSG6Q00889 435 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 MORN5Q5VZ52 161 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 MICU3Q86XE3 530 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 NAF1Q96HR8 494 aaKnown RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 ZBTB45Q96K62 511 aaPredicted RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 AFF4Q9UHB7 1163 aaKnown RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 DDX20Q9UHI6 824 aaKnown RBP5.61□□□□□ -1.51
LTN1-204ENST00000475344 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
LTN1-204ENST00000475344 SHROOM4Q9ULL8 1493 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 WDR17Q8IZU2 1322 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 LOC102723971A0A1B0GUV8 181 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 TRIM43BA6NCK2 446 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 MBD3L4A6NDZ8 208 aaPredicted RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 MBD3L3A6NE82 208 aaPredicted RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 RAB27BO00194 218 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 PMPCBO75439 489 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 FGAP02671 866 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 CYP2A6P11509 494 aaPredicted RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 MYCLP12524 364 aaPredicted RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 KLRC1P26715 233 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 COPB1P53618 953 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms